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SCNpilot_bf_inoc_scaffold_5018_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_5018_curated_1

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1..642
DNA (642bp) protein (214aa)
Aldo/keto reductase n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BDK3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KKN83638.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
auxin-induced protein PCNT115
SCNpilot_bf_inoc_scaffold_5018_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1215..1472
DNA (258bp) protein (86aa)
Putative cyclase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP24_BRASB
cyclase
Cyclase {ECO:0000313|EMBL:KGM33763.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_bf_inoc_scaffold_5018_curated_3

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comp(1494..2642)
DNA (1149bp) protein (383aa)
Putative monooxygenase n=1 Tax=uncultured bacterium B7P37metaSE RepID=C8CIL1_9BACT
Putative monooxygenase {ECO:0000313|EMBL:ACV30051.1}; TaxID=670783 species="Bacteria; environmental samples.;" source="uncultured bacterium B7P37metaSE.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_5018_curated_4
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2916..3389)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037503BB
Uncharacterized protein {ECO:0000313|EMBL:KID29132.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_5018_curated_5
unknown

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comp(3386..3727)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_5018_curated_6
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3724..5001)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MSW9_GORPV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA75090.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
SCNpilot_bf_inoc_scaffold_5018_curated_7
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5288..6583
DNA (1296bp) protein (432aa)
MFS transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58E9D
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACQ80956.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_bf_inoc_scaffold_5018_curated_8
unknown

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comp(6743..7765)
DNA (1023bp) protein (341aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_5018_curated_9
unknown

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7941..8300
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_5018_curated_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8788..9666
DNA (879bp) protein (293aa)
Luciferase family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SK51_NOCSJ
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:EXG80782.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
luciferase family protein
SCNpilot_bf_inoc_scaffold_5018_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9677..10420
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4C5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11470.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_5018_curated_12
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10436..10657)
DNA (222bp) protein (74aa)
Sec-independent protein translocase protein tatA/E-like protein n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RKT4_DEIPM
Sec-independent protein translocase protein tatA/E-like protein; K03117 sec-independent protein translocase protein TatB
Sec-independent protein translocase protein tatA/E-like protein {ECO:0000313|EMBL:ADY26796.1}; TaxID=693977 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
SCNpilot_bf_inoc_scaffold_5018_curated_13
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11891..12022
DNA (132bp) protein (44aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KJC63080.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
SCNpilot_bf_inoc_scaffold_5018_curated_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12805..12978
DNA (174bp) protein (58aa)
Resiniferatoxin-binding phosphotriesterase-related protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EAD6_9ACTN
Resiniferatoxin-binding phosphotriesterase-related protein {ECO:0000313|EMBL:EHN09352.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_5018_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12998..13690
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00037EC5A1
Uncharacterized protein {ECO:0000313|EMBL:CDK01945.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_5018_curated_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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13703..14599
DNA (897bp) protein (299aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B47888
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_5018_curated_17
Pseudomonas sp. GM80, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14831..16408
DNA (1578bp) protein (526aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Pseudomonas sp. GM80 RepID=J2WIK0_9PSED
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJN18552.1}; Flags: Precursor;; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_5018_curated_18
alpha proteobacterium HIMB59, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16461..16907
DNA (447bp) protein (149aa)
peptidase M19 n=1 Tax=Patulibacter americanus RepID=UPI0003B35AC8
membrane dipeptidase (Peptidase family M19)
Membrane dipeptidase (Peptidase family M19) {ECO:0000313|EMBL:AFS48282.1}; TaxID=744985 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae.;" source="alpha proteobacterium HIMB59.;"
Displaying 18 items

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