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SCNpilot_bf_inoc_scaffold_777_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_777_curated_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1..873)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B4A266
Transcriptional regulator {ECO:0000313|EMBL:EHN12800.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCG11A.04; transcriptional regulator
SCNpilot_bf_inoc_scaffold_777_curated_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

948..1694
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFN3_9ACTO
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ACZ87553.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_bf_inoc_scaffold_777_curated_3
unknown

Not on your lists

comp(1714..2505)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_777_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2530..5319)
DNA (2790bp) protein (930aa)
Transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F753_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB48824.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_777_curated_5
Candidatus Aquiluna sp. IMCC13023, Candidatus Aquiluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5386..5793
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0QZY6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC91172.1}; TaxID=1081644 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Candidatus Aquiluna.;" source="Candidatus Aquiluna sp. IMCC13023.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_777_curated_6
unknown

Not on your lists

5790..6116
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_777_curated_7
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6129..6629
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Rhodococcus RepID=Q0SJ13_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG92473.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
SCNpilot_bf_inoc_scaffold_777_curated_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6626..7093
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM49 RepID=J3G7N1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AII11017.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_777_curated_9
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7081..7860)
DNA (780bp) protein (260aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KQG0_9ACTO
IclR family transcriptional regulator {ECO:0000313|EMBL:KFG00794.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
IclR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_777_curated_10
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7883..9460)
DNA (1578bp) protein (526aa)
3-(3-hydroxyphenyl)propionate hydroxylase (EC:1.14.13.-); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
FAD binding domain protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2JKE3_9NOCA
FAD binding domain protein {ECO:0000313|EMBL:EJJ00395.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
SCNpilot_bf_inoc_scaffold_777_curated_11
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9470..10522)
DNA (1053bp) protein (351aa)
NADPH:quinone reductase (EC:1.6.5.5)
Oxidoreductase, zinc-binding dehydrogenase family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FEF7_9ACTO
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:ELP69773.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
SCNpilot_bf_inoc_scaffold_777_curated_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10534..11466)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00035D42C0
Glyoxalase {ECO:0000313|EMBL:AII11014.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
Glyoxalase/bleomycin resistance protein/dioxygenase protein
SCNpilot_bf_inoc_scaffold_777_curated_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11594..12586
DNA (993bp) protein (331aa)
hypothetical protein; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5F2_BRAJP
Amidohydrolase 2 {ECO:0000313|EMBL:ACK52389.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_bf_inoc_scaffold_777_curated_14
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12583..13527
DNA (945bp) protein (315aa)
intradiol ring-cleavage dioxygenase; K03381 catechol 1,2-dioxygenase [EC:1.13.11.1]
Intradiol ring-cleavage dioxygenase n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WLG1_BURSC
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ADG20057.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCNpilot_bf_inoc_scaffold_777_curated_15
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13527..14651
DNA (1125bp) protein (375aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TFT0_BURSG
Maleylacetate reductase {ECO:0000313|EMBL:KFZ78075.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
iron-containing alcohol dehydrogenase
SCNpilot_bf_inoc_scaffold_777_curated_16
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14644..15417
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IU88_MYCSM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGB22294.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
SCNpilot_bf_inoc_scaffold_777_curated_17
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15417..15953
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00035D4C36
hypothetical protein
ORF3 {ECO:0000313|EMBL:AAL78055.1}; TaxID=1836 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (Streptomyces erythraeus).;"
SCNpilot_bf_inoc_scaffold_777_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15913..16674)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZV8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49934.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_777_curated_19
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16890..17648)
DNA (759bp) protein (253aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V3N6_9ACTO
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AII10973.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
short-chain dehydrogenase
SCNpilot_bf_inoc_scaffold_777_curated_20
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17740..18576
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JM34_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KFA94102.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_777_curated_21
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

18601..18888
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATV4_RUBXD
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABG05174.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_bf_inoc_scaffold_777_curated_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18874..19806)
DNA (933bp) protein (311aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMM1_AGRRK
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ACM28802.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_bf_inoc_scaffold_777_curated_23
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19803..21251)
DNA (1449bp) protein (483aa)
FAD-linked oxidase n=1 Tax=Vibrio parahaemolyticus O1:K33 str. CDC_K4557 RepID=S5J7E8_VIBPH
FAD-linked oxidase
Tax=GWB2_Geobacteraceae_52_12_curated
SCNpilot_bf_inoc_scaffold_777_curated_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21281..22132)
DNA (852bp) protein (284aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMN1_AGRRK
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase protein {ECO:0000313|EMBL:ACM28812.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_bf_inoc_scaffold_777_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22220..23014
DNA (795bp) protein (265aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:ACV80375.1}; EC=4.2.1.80 {ECO:0000313|EMBL:ACV80375.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
2-oxopent-4-enoate hydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHS2_NAKMY
SCNpilot_bf_inoc_scaffold_777_curated_26
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23030..23917
DNA (888bp) protein (296aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
acetaldehyde dehydrogenase (EC:1.2.1.10); K04073 acetaldehyde dehydrogenase [EC:1.2.1.10]
Acetaldehyde dehydrogenase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H9B8_STRA9
SCNpilot_bf_inoc_scaffold_777_curated_27
unknown

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comp(23824..24054)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_777_curated_28
unknown

Not on your lists

comp(24084..24278)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_777_curated_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24445..24825
DNA (381bp) protein (127aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=526977 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus ATCC
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Bacillus cereus ATCC 4342 RepID=C2QS60_BACCE
4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase
SCNpilot_bf_inoc_scaffold_777_curated_30
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

24822..25358
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AKU6_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN01970.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Displaying items 1-30 of 34 in total

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