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SCNpilot_bf_inoc_scaffold_2045_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2045_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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132..1166
-----------------
DNA (1035bp)
protein (345aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1L7_CONWI
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB52180.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1154..1816
-----------------
DNA (663bp)
protein (221aa)
Putative two-component system response regulator n=1 Tax=Patulibacter medicamentivorans RepID=H0E9F8_9ACTN
Putative two-component system response regulator {ECO:0000313|EMBL:EHN09691.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
LuxR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_2045_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1874..4867)
-----------------
DNA (2994bp)
protein (998aa)
Transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFE6_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB53739.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_4
unknown

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comp(4875..5027)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_5
bacterium YEK0313, Bacteria

Not on your lists

5238..6254
-----------------
DNA (1017bp)
protein (339aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003717913
L-allo-threonine aldolase {ECO:0000313|EMBL:CEJ11409.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_bf_inoc_scaffold_2045_curated_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6235..7173)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036CF0E9
potassium-tellurite ethidium and proflavin transporter; K03304 tellurite resistance/dicarboxylate transporter, TDT family
Potassium-tellurite ethidium and proflavin transporter {ECO:0000313|EMBL:ADI09713.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_bf_inoc_scaffold_2045_curated_7
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7249..8520)
-----------------
DNA (1272bp)
protein (424aa)
Tat-translocated protein; K15733 dye decolorizing peroxidase [EC:1.11.1.19]
Tat-translocated enzyme n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WNK0_9ACTO
Tat-translocated enzyme {ECO:0000313|EMBL:EFL25857.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
SCNpilot_bf_inoc_scaffold_2045_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(8517..9404)
-----------------
DNA (888bp)
protein (296aa)
Iron permease FTR1 n=1 Tax=Patulibacter medicamentivorans RepID=H0E398_9ACTN
Iron permease FTR1 {ECO:0000313|EMBL:EHN11848.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
iron permease FTR1; K07243 high-affinity iron transporter
SCNpilot_bf_inoc_scaffold_2045_curated_9
unknown

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comp(9781..9957)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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11995..12720
-----------------
DNA (726bp)
protein (242aa)
Beta-phosphoglucomutase family hydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8H0_CONWI
beta-phosphoglucomutase family hydrolase
Beta-phosphoglucomutase family hydrolase {ECO:0000313|EMBL:ADB50934.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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12717..15077
-----------------
DNA (2361bp)
protein (787aa)
Glycoside hydrolase family 65 central catalytic n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6V8_THECD
glycoside hydrolase family 65 central catalytic
Glycoside hydrolase family 65 central catalytic {ECO:0000313|EMBL:ACY98362.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_bf_inoc_scaffold_2045_curated_12
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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15599..15919
-----------------
DNA (321bp)
protein (107aa)
ArsR family transcriptional regulator n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003635784
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC67647.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_2045_curated_13
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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15916..16419
-----------------
DNA (504bp)
protein (168aa)
sfa:Sfla_0223 transcriptional regulator, ArsR family id=1245030 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:GAB15168.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
ArsR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_2045_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16490..16843)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F978_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49045.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_15
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16978..17895
-----------------
DNA (918bp)
protein (306aa)
Uncharacterized conserved protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7N075_SACVD
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ACU97611.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
SCNpilot_bf_inoc_scaffold_2045_curated_16
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17956..19038
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:CDO03162.1}; TaxID=171693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus picturae.;"
SCNpilot_bf_inoc_scaffold_2045_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19234..19995)
-----------------
DNA (762bp)
protein (254aa)
metallophosphatase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023756FE
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_bf_inoc_scaffold_2045_curated_18
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(19992..21173)
-----------------
DNA (1182bp)
protein (394aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_bf_inoc_scaffold_2045_curated_19
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(21167..21529)
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000362FA5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL91621.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_bf_inoc_scaffold_2045_curated_20
unknown

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22170..22595
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B65C4E
SCNpilot_bf_inoc_scaffold_2045_curated_21
unknown

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22708..23454
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_22
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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comp(23451..25292)
-----------------
DNA (1842bp)
protein (614aa)
tktA2; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B38C
Transketolase {ECO:0000313|EMBL:KGI82096.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
SCNpilot_bf_inoc_scaffold_2045_curated_23
unknown

Not on your lists

25343..25786
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25832..26473)
-----------------
DNA (642bp)
protein (214aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12]
Putative agmatine deiminase n=1 Tax=Patulibacter medicamentivorans RepID=H0E357_9ACTN
SCNpilot_bf_inoc_scaffold_2045_curated_25
unknown

Not on your lists

26593..26739
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

26926..27876
-----------------
DNA (951bp)
protein (317aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5T3_CONWI
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADB52632.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_27
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27873..28127
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HJW6_ACTM4
hypothetical protein; K09981 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93303.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_bf_inoc_scaffold_2045_curated_28
unknown

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28115..28438
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2045_curated_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28485..29174)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9H1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49138.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2045_curated_30
unknown

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comp(30169..30582)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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