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SCNpilot_bf_inoc_scaffold_1811_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1811_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

348..800
DNA (453bp) protein (151aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H4_CONWI
SCNpilot_bf_inoc_scaffold_1811_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1192..2169)
DNA (978bp) protein (326aa)
Transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT1_CONWI
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB51443.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2334..3212
DNA (879bp) protein (293aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT2_CONWI
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADB51444.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3209..3694
DNA (486bp) protein (162aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT3_CONWI
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADB51445.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_5
unknown

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3708..3968
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_6
unknown

Not on your lists

3965..4258
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_7
unknown

Not on your lists

4255..4527
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_8
unknown

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4527..4784
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_9
unknown

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4801..5424
DNA (624bp) protein (208aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_10
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5424..6299
DNA (876bp) protein (292aa)
FAD-binding molybdopterin dehydrogenase protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036D84D5
Carbon monoxide dehydrogenase, medium subunit {ECO:0000313|EMBL:EWM64911.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
SCNpilot_bf_inoc_scaffold_1811_curated_11
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6303..6782
DNA (480bp) protein (160aa)
putative carbon monoxide dehydrogenase small chain; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X874_9PSEU
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:EHR49105.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_bf_inoc_scaffold_1811_curated_12
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6786..9176
DNA (2391bp) protein (797aa)
carbon-monoxide dehydrogenase, large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase, large subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT4_CONWI
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KIE39462.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
SCNpilot_bf_inoc_scaffold_1811_curated_13
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9173..10144
DNA (972bp) protein (324aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family n=1 Tax=Saccharomonospora glauca K62 RepID=I1CXV4_9PSEU
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EIE97528.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
SCNpilot_bf_inoc_scaffold_1811_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11086..12393
DNA (1308bp) protein (436aa)
VWA containing CoxE family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT8_CONWI
VWA containing CoxE family protein; K07161
VWA containing CoxE family protein {ECO:0000313|EMBL:ADB51450.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_15
unknown

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12393..12590
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_16
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12580..13035
DNA (456bp) protein (152aa)
carbon-monoxide dehydrogenase, large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Putative carbon monoxide dehydrogenase large subunit n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WL87_9ACTO
Putative carbon monoxide dehydrogenase large subunit {ECO:0000313|EMBL:GAB92897.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
SCNpilot_bf_inoc_scaffold_1811_curated_17
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13079..13507
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DZ91_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH69953.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
carbon monoxide dehydrogenase subunit G
SCNpilot_bf_inoc_scaffold_1811_curated_18
unknown

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13529..13840
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1811_curated_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13863..16271
DNA (2409bp) protein (803aa)
carbon-monoxide dehydrogenase, large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase, large subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT4_CONWI
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ADB51446.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_20
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16199..17752)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RKE9_MYCRN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV73551.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_bf_inoc_scaffold_1811_curated_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17755..18309)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9B9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91664.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_bf_inoc_scaffold_1811_curated_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18419..19048
DNA (630bp) protein (210aa)
molybdenum cofactor biosynthesis protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Molybdenum cofactor biosynthesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCT6_CONWI
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:ADB51448.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_23
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20805..21287
DNA (483bp) protein (161aa)
universal stress protein UspA n=1 Tax=Patulibacter americanus RepID=UPI0003B6E816
Contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ10879.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
arabinose efflux permease family protein
SCNpilot_bf_inoc_scaffold_1811_curated_24
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21292..21657)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBP5_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ09122.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
SCNpilot_bf_inoc_scaffold_1811_curated_25
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21827..22183
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZ65_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU69621.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_bf_inoc_scaffold_1811_curated_26
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22237..22821
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000371BDB3
putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAL92747.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_bf_inoc_scaffold_1811_curated_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22818..24050
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037E406B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49936.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1811_curated_28
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24162..24746)
DNA (585bp) protein (195aa)
Lipoprotein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XR07_9ACTO
hypothetical protein
Lipoprotein {ECO:0000313|EMBL:EFL40520.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
SCNpilot_bf_inoc_scaffold_1811_curated_29
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24800..25567)
DNA (768bp) protein (256aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
metallophosphatase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B9621
metallophosphoesterase
SCNpilot_bf_inoc_scaffold_1811_curated_30
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26079..26945
DNA (867bp) protein (289aa)
putative thiosulfate sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Putative thiosulfate sulfurtransferase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GYG4_ACTM4
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
Displaying items 1-30 of 42 in total

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