ggKbase home page

SCNpilot_bf_inoc_scaffold_1803_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1803_curated_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..804)
DNA (804bp) protein (268aa)
fadD36; acyl-CoA synthetase (EC:2.3.1.86); K12429 fatty acid CoA ligase FadD36
Acyl-CoA synthetase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NAU8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AHI01523.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCNpilot_bf_inoc_scaffold_1803_curated_2
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1284..2474
DNA (1191bp) protein (397aa)
Peptidase dimerization domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D228_9ACTO
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFC82996.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
peptidase M20
SCNpilot_bf_inoc_scaffold_1803_curated_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2478..3458
DNA (981bp) protein (327aa)
Leucyl aminopeptidase (Aminopeptidase T)-like protein n=1 Tax=Frankia sp. EUN1f RepID=D3D236_9ACTO
Leucyl aminopeptidase (Aminopeptidase T)-like protein {ECO:0000313|EMBL:EFC83004.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1803_curated_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

3455..4537
DNA (1083bp) protein (361aa)
Peptidase, M20/M25/M40 family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXZ2_THERP
peptidase, M20/M25/M40 family
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:ACM06350.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_bf_inoc_scaffold_1803_curated_5
unknown

Not on your lists

comp(4677..4862)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1803_curated_6
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4976..5446
DNA (471bp) protein (157aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:EFC83001.1}; EC=1.5.99.11 {ECO:0000313|EMBL:EFC83001.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Frankia sp. EUN1f RepID=D3D233_9ACTO
SCNpilot_bf_inoc_scaffold_1803_curated_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5780..7414
DNA (1635bp) protein (545aa)
methylmalonyl-CoA mutase N-terminal domain-containing protein; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
methylmalonyl-CoA mutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000363764F
Methylmalonyl-CoA mutase, N-terminal domain {ECO:0000313|EMBL:BAD40171.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCNpilot_bf_inoc_scaffold_1803_curated_8
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7414..7842
DNA (429bp) protein (143aa)
glyoxalase family protein; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364DC80
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
SCNpilot_bf_inoc_scaffold_1803_curated_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7835..8989
DNA (1155bp) protein (385aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
SCNpilot_bf_inoc_scaffold_1803_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8982..9404
DNA (423bp) protein (141aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
Cobalamin B12-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F959_CONWI
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ADB53054.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1803_curated_11
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9456..10136
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002DEE455
GntR family transcriptional regulator {ECO:0000313|EMBL:AJE38736.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
mdcY; GntR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1803_curated_12
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10301..11728
DNA (1428bp) protein (476aa)
aspA; aspartate ammonia-lyase; K01744 aspartate ammonia-lyase [EC:4.3.1.1]
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
aspartate ammonia-lyase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034DD07F
SCNpilot_bf_inoc_scaffold_1803_curated_13
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11725..13770
DNA (2046bp) protein (682aa)
agaF; AgaF protein; K01473 N-methylhydantoinase A [EC:3.5.2.14]
N-methylhydantoinase A n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FJT4_PELBH
Methylhydantoinase {ECO:0000313|EMBL:KDN18559.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
SCNpilot_bf_inoc_scaffold_1803_curated_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13767..15347
DNA (1581bp) protein (527aa)
agaG; AgaG protein; K01474 N-methylhydantoinase B [EC:3.5.2.14]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000379A07A
Methylhydantoinase {ECO:0000313|EMBL:KGM31366.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Displaying 14 items

View Taxonomy