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SCNpilot_bf_inoc_scaffold_1590_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1590_curated_1
unknown

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comp(95..532)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1590_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(529..1290)
DNA (762bp) protein (254aa)
Polysaccharide deacetylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZG8_CONWI
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADB53806.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1590_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1410..2600)
DNA (1191bp) protein (397aa)
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E016_9ACTN
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:EHN12975.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC-type sugar transporter periplasmic component-like protein; K10439 ribose transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_1590_curated_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2744..4255
DNA (1512bp) protein (504aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Ribose ABC transport system ATP-binding protein RbsA (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E017_9ACTN
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:AIY18952.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
SCNpilot_bf_inoc_scaffold_1590_curated_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4303..5271
DNA (969bp) protein (323aa)
Ribose ABC transport system permease protein RbsC (TC 3.A.1.2.1) n=1 Tax=Patulibacter medicamentivorans RepID=H0E018_9ACTN
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:AJR18718.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
sugar ABC transporter permease; K10440 ribose transport system permease protein
SCNpilot_bf_inoc_scaffold_1590_curated_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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5273..7384
DNA (2112bp) protein (704aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B6AB8
N-methylhydantoinase A/acetone carboxylase, beta subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_bf_inoc_scaffold_1590_curated_7
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7381..9609
DNA (2229bp) protein (743aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14]
Putative 5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P3K2_STRVR
Putative 5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ELS51060.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
SCNpilot_bf_inoc_scaffold_1590_curated_8
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9632..10834
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase, N-terminal domain protein n=2 Tax=Mycobacterium hassiacum RepID=K5BFL5_9MYCO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDO91462.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
SCNpilot_bf_inoc_scaffold_1590_curated_9
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10849..11619
DNA (771bp) protein (257aa)
short-chain dehydrogenase; K00100 [EC:1.1.1.-]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46PZ5_CUPPJ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AAZ64789.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_bf_inoc_scaffold_1590_curated_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11597..12061
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7Z3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ62636.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
acyl-CoA dehydrogenase-like protein
SCNpilot_bf_inoc_scaffold_1590_curated_11
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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12022..12726
DNA (705bp) protein (235aa)
Acyl-CoA dehydrogenase n=1 Tax=Amycolatopsis mediterranei RB RepID=T1VA99_AMYMD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AEK45824.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_bf_inoc_scaffold_1590_curated_12
unknown

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12737..13024
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 12 items

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