ggKbase home page

SCNpilot_bf_inoc_scaffold_1946_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1946_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2..2071)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA14_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53109.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1946_curated_2
unknown

Not on your lists

comp(2320..2520)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1946_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3040..4092
DNA (1053bp) protein (351aa)
sodium:proton antiporter n=1 Tax=Patulibacter americanus RepID=UPI0003B727A9
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
sodium/proton antiporter
SCNpilot_bf_inoc_scaffold_1946_curated_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4092..4460
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003452C66
Uncharacterized protein {ECO:0000313|EMBL:KJK45693.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1946_curated_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4392..5474)
DNA (1083bp) protein (361aa)
Delta5 acyl-lipid desaturase {ECO:0000313|EMBL:EHN10880.1}; EC=1.14.99.- {ECO:0000313|EMBL:EHN10880.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]
Delta5 acyl-lipid desaturase n=1 Tax=Patulibacter medicamentivorans RepID=H0E622_9ACTN
SCNpilot_bf_inoc_scaffold_1946_curated_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5599..6300)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00037BC6B4
MgtC family magnesium transporter {ECO:0000313|EMBL:ETK31869.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_bf_inoc_scaffold_1946_curated_7
unknown

Not on your lists

comp(6373..6651)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1946_curated_8
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7192..8337)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI00037302A2
MFS transporter {ECO:0000313|EMBL:KDN81378.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
major facilitator transporter
SCNpilot_bf_inoc_scaffold_1946_curated_9
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9122..10552)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPM1_DESK7
Modification methylase {ECO:0000313|EMBL:AHF78808.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1946_curated_10
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10539..11177)
DNA (639bp) protein (213aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034D3815
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:AHF78807.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
SCNpilot_bf_inoc_scaffold_1946_curated_11
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11197..12195)
DNA (999bp) protein (333aa)
Aldo/keto reductase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X2F5_STRVR
Voltage-gated potassium channel {ECO:0000313|EMBL:KHL01444.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
aldo/keto reductase
SCNpilot_bf_inoc_scaffold_1946_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12863..13546)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F232_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50207.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1946_curated_13
unknown

Not on your lists

13653..15020
DNA (1368bp) protein (456aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1946_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15017..15871
DNA (855bp) protein (285aa)
LuxR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B50D00
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48959.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1946_curated_15
unknown

Not on your lists

comp(15947..16276)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1946_curated_16
Mycobacterium liflandii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16298..17119)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Mycobacterium marinum RepID=S7QZP5_MYCMR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGC61478.1}; TaxID=459424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium liflandii (strain 128FXT).;"
SCNpilot_bf_inoc_scaffold_1946_curated_17
unknown

Not on your lists

comp(17213..17791)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1946_curated_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18008..19345
DNA (1338bp) protein (446aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U152_9CHLR
Drug resistance transporter, EmrB/QacA family {ECO:0000313|EMBL:EWM13163.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
EmrB/QacA family drug resistance transporter
SCNpilot_bf_inoc_scaffold_1946_curated_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19420..19701)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6A71A
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_bf_inoc_scaffold_1946_curated_20
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19836..20030
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000368F602
Uncharacterized protein {ECO:0000313|EMBL:AHH15850.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1946_curated_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(20093..20683)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9U3_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40586.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_bf_inoc_scaffold_1946_curated_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21904..22218
DNA (315bp) protein (105aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Probable protein kinase UbiB n=1 Tax=Variovorax sp. CF313 RepID=J2JRU8_9BURK
ubiB; putative ubiquinone biosynthesis protein UbiB
Displaying 22 items

View Taxonomy