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SCNpilot_bf_inoc_scaffold_1720_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1720_curated_1
unknown

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comp(114..488)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1720_curated_2
Heterocephalus glaber, Heterocephalus, Rodentia, Mammalia, Chordata, Metazoa

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comp(1128..2069)
DNA (942bp) protein (314aa)
PREDICTED: serine/arginine repetitive matrix protein 2-like isoform X2 n=1 Tax=Chinchilla lanigera RepID=UPI00038EA6AB
Srrm2; serine/arginine repetitive matrix 2
Serine/arginine repetitive matrix protein 2 {ECO:0000313|EMBL:EHB03163.1}; Flags: Fragment;; TaxID=10181 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi; Bathyergidae; Heterocephalus.;" source="Heterocephalus glaber (Naked mole rat).;"
SCNpilot_bf_inoc_scaffold_1720_curated_3
unknown

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comp(2085..3278)
DNA (1194bp) protein (398aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1720_curated_4
unknown

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3821..3970
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1720_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4380..5981
DNA (1602bp) protein (534aa)
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K2_CONWI
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ADB53936.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1720_curated_6

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6072..6914
DNA (843bp) protein (281aa)
putative thiosulfate sulfurtransferase (EC:2.8.1.1)
Putative thiosulfate sulfurtransferase n=2 Tax=Mycobacterium RepID=I2A8K9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KKL27289.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_1720_curated_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(6938..7405)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RU66_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG05673.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_bf_inoc_scaffold_1720_curated_8
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7539..7970)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI00031753A5
Cation-binding protein {ECO:0000313|EMBL:AIF44343.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
hemerythrin hhE cation binding domain-containing protein
SCNpilot_bf_inoc_scaffold_1720_curated_9
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7981..9282)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CDJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20703.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
SCNpilot_bf_inoc_scaffold_1720_curated_10
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(9272..9949)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000361158B
Uncharacterized protein {ECO:0000313|EMBL:CCM62225.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_1720_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9984..10706)
DNA (723bp) protein (241aa)
Respiratory nitrate reductase gamma chain {ECO:0000313|EMBL:EHN12537.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EHN12537.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
respiratory nitrate reductase subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase gamma chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E198_9ACTN
SCNpilot_bf_inoc_scaffold_1720_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10703..11353)
DNA (651bp) protein (217aa)
Respiratory nitrate reductase delta chain {ECO:0000313|EMBL:EHN12538.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EHN12538.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Respiratory nitrate reductase delta chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E199_9ACTN
nitrate reductase molybdenum cofactor assembly chaperone; K00373 nitrate reductase 1, delta subunit
SCNpilot_bf_inoc_scaffold_1720_curated_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(11350..12933)
DNA (1584bp) protein (528aa)
Respiratory nitrate reductase beta chain {ECO:0000313|EMBL:EHN12539.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EHN12539.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Respiratory nitrate reductase beta chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E1A0_9ACTN
SCNpilot_bf_inoc_scaffold_1720_curated_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12930..14513)
DNA (1584bp) protein (528aa)
Respiratory nitrate reductase alpha chain {ECO:0000313|EMBL:EHN12540.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EHN12540.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Respiratory nitrate reductase alpha chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E1A1_9ACTN
SCNpilot_bf_inoc_scaffold_1720_curated_15
unknown

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15342..15473
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 15 items

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