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SCNpilot_bf_inoc_scaffold_1725_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1725_curated_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_2
unknown

Not on your lists

comp(181..306)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_3
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

624..1826
DNA (1203bp) protein (401aa)
Putative 3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFR2_MOBAS
Putative 3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EAS48911.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
3-ketoacyl-CoA thiolase B, peroxisomal
SCNpilot_bf_inoc_scaffold_1725_curated_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2091..3332
DNA (1242bp) protein (414aa)
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TU15_9PROT
Amino acid dehydrogenase {ECO:0000313|EMBL:EXL06516.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_bf_inoc_scaffold_1725_curated_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3344..4147
DNA (804bp) protein (268aa)
Asp/Glu racemase; K01799 maleate isomerase [EC:5.2.1.1]
Asp/Glu racemase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHW1_9RHIZ
Asp/Glu racemase {ECO:0000313|EMBL:CDX41314.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_bf_inoc_scaffold_1725_curated_6
unknown

Not on your lists

comp(4359..4727)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_7
unknown

Not on your lists

5166..5297
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5330..6040
DNA (711bp) protein (237aa)
Inner-membrane translocator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCQ4_9BURK
ABC transporter permease {ECO:0000313|EMBL:EXL06508.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_bf_inoc_scaffold_1725_curated_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6007..6186
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003613E13
ABC transporter permease {ECO:0000313|EMBL:EXL06508.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
inner-membrane translocator
SCNpilot_bf_inoc_scaffold_1725_curated_10
unknown

Not on your lists

comp(6340..6657)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_11
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6797..7027
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003813F48
ABC transporter permease {ECO:0000313|EMBL:EXL06507.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
branched-chain amino acid ABC transporter; K01998 branched-chain amino acid transport system permease protein
SCNpilot_bf_inoc_scaffold_1725_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8785..9168)
DNA (384bp) protein (128aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
peptidase S41 n=1 Tax=Patulibacter americanus RepID=UPI0003B5913D
Carboxyl-terminal protease {ECO:0000313|EMBL:EHN12941.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_bf_inoc_scaffold_1725_curated_13
unknown

Not on your lists

10059..10601
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10789..11637)
DNA (849bp) protein (283aa)
Cell division ATP-binding protein FtsE n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F905_CONWI
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ADB53000.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1725_curated_15
unknown

Not on your lists

comp(11797..12159)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12254..13285)
DNA (1032bp) protein (344aa)
quinolinate synthetase complex subunit alpha; K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Quinolinate synthase A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F911_CONWI
SCNpilot_bf_inoc_scaffold_1725_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13412..14170
DNA (759bp) protein (253aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ADB49543.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ADB49543.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-formamidopyrimidine glycosylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDG9_CONWI
SCNpilot_bf_inoc_scaffold_1725_curated_18
unknown

Not on your lists

comp(14194..14343)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_19
unknown

Not on your lists

comp(14343..14861)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_20
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14929..15117)
DNA (189bp) protein (63aa)
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC88_9RHIZ
Tax=CG_Anaero_03
SCNpilot_bf_inoc_scaffold_1725_curated_21
unknown

Not on your lists

15463..15840
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15856..16320
DNA (465bp) protein (155aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Patulibacter medicamentivorans RepID=H0E4Z9_9ACTN
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:EHN11250.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ECF family sigma-70 type sigma factor
SCNpilot_bf_inoc_scaffold_1725_curated_23
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16317..16895
DNA (579bp) protein (193aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VDY7_9ACTO
SCNpilot_bf_inoc_scaffold_1725_curated_24
unknown

Not on your lists

16977..17678
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17708..18361)
DNA (654bp) protein (218aa)
Phospholipase/Carboxylesterase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3C9_CONWI
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ADB50409.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1725_curated_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18376..18732)
DNA (357bp) protein (119aa)
Peptide chain release factor 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F914_CONWI
peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1725_curated_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18729..19316)
DNA (588bp) protein (196aa)
Peptide chain release factor 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F914_CONWI
peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1725_curated_28
unknown

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comp(19483..19863)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1725_curated_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19870..22704)
DNA (2835bp) protein (945aa)
Protein translocase subunit SecA n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J1_9ACTN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
SCNpilot_bf_inoc_scaffold_1725_curated_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22797..23147
DNA (351bp) protein (117aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F918_CONWI
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ADB53013.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 36 in total

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