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SCNpilot_bf_inoc_scaffold_2082_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2082_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..669
DNA (669bp) protein (223aa)
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
Transketolase central region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAB0_CONWI
Transketolase central region {ECO:0000313|EMBL:ADB49179.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

692..1936
DNA (1245bp) protein (415aa)
catalytic domain of components of various dehydrogenase complexes; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S1_CONWI
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ADB52815.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2102..3610
DNA (1509bp) protein (503aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K7_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ40150.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_bf_inoc_scaffold_2082_curated_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3607..4611
DNA (1005bp) protein (335aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K8_SPHTD
inner-membrane translocator; K10440 ribose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ACZ40151.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_bf_inoc_scaffold_2082_curated_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4654..5943
DNA (1290bp) protein (430aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K9_SPHTD
periplasmic binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACZ40152.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_bf_inoc_scaffold_2082_curated_6
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5973..8183
DNA (2211bp) protein (737aa)
N,N-dimethylformamidase large subunit; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
Large subunit of N,N-dimethylformamidase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SBC3_9BACL
Large subunit of N,N-dimethylformamidase {ECO:0000313|EMBL:EHQ63606.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
SCNpilot_bf_inoc_scaffold_2082_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8197..9330)
DNA (1134bp) protein (378aa)
Transcriptional regulator, CdaR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6E8_CONWI
CdaR family transcriptional regulator
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ADB50715.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_8
unknown

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comp(9398..9499)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2082_curated_9
unknown

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comp(9542..9745)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2082_curated_10
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10339..11118
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NCW7_9ACTO
Peptidase C26 {ECO:0000313|EMBL:CDO23632.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
peptidase C26; K07010 putative glutamine amidotransferase
SCNpilot_bf_inoc_scaffold_2082_curated_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

11115..12386
DNA (1272bp) protein (424aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378F8F0
Tax=RBG_16_Armatimonadetes_67_12_curated
SCNpilot_bf_inoc_scaffold_2082_curated_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12417..13850
DNA (1434bp) protein (478aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
L-glutamine synthetase {ECO:0000313|EMBL:ABE46581.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ABE46581.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003729A6C
SCNpilot_bf_inoc_scaffold_2082_curated_13
Brucella ceti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14205..14570
DNA (366bp) protein (122aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=40 Tax=Brucella RepID=A5VQP6_BRUO2
short-chain dehydrogenase/reductase SDR
Short chain dehydrogenase {ECO:0000313|EMBL:EEH14643.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella ceti str. Cudo.;"
SCNpilot_bf_inoc_scaffold_2082_curated_14
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14917..15906
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI000349EF6B
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABS03121.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_bf_inoc_scaffold_2082_curated_15
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15976..17475
DNA (1500bp) protein (500aa)
Putative amino acid/metabolite transporter n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z7G6_STRSW
amino acid/metabolite transporter
Putative amino acid/metabolite transporter {ECO:0000313|EMBL:CBG73028.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_bf_inoc_scaffold_2082_curated_16
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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17472..18275
DNA (804bp) protein (268aa)
alpha/beta hydrolase n=1 Tax=Saccharomonospora saliphila RepID=UPI00036FDCA1
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:EPJ38162.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_bf_inoc_scaffold_2082_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18368..19810
DNA (1443bp) protein (481aa)
Aldehyde Dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7T0_CONWI
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADB52824.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19859..20572
DNA (714bp) protein (238aa)
GntR domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S9_CONWI
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ADB52823.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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20930..21346
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NCW7_9ACTO
Putative glutamine amidotransferase {ECO:0000313|EMBL:EXG82576.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidase C26; K07010 putative glutamine amidotransferase
SCNpilot_bf_inoc_scaffold_2082_curated_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21312..22115
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S7_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB52821.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22112..23029
DNA (918bp) protein (306aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamate--ammonia ligase {ECO:0000313|EMBL:ADB52820.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ADB52820.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamate--ammonia ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S6_CONWI
SCNpilot_bf_inoc_scaffold_2082_curated_22
Rhodococcus sp. P27, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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23011..23412
DNA (402bp) protein (134aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NDM8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERB55974.1}; TaxID=1384060 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. P27.;"
SCNpilot_bf_inoc_scaffold_2082_curated_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23524..24567
DNA (1044bp) protein (348aa)
Glu/Leu/Phe/Val dehydrogenase; K00263 leucine dehydrogenase [EC:1.4.1.9]
Glu/Leu/Phe/Val dehydrogenase dimerization region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S4_CONWI
Glu/Leu/Phe/Val dehydrogenase dimerization region {ECO:0000313|EMBL:ADB52818.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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24749..26014
DNA (1266bp) protein (422aa)
Extracellular ligand-binding receptor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0B7_9RHIZ
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_bf_inoc_scaffold_2082_curated_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

26027..26782
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34E67
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADB52794.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_26
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26804..27049)
DNA (246bp) protein (82aa)
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KGD54417.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
SCNpilot_bf_inoc_scaffold_2082_curated_27
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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27148..27438
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIU9_MEISD
hypothetical protein; K01996 branched-chain amino acid transport system ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ADH65105.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SCNpilot_bf_inoc_scaffold_2082_curated_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

27641..28300
DNA (660bp) protein (220aa)
Inner-membrane translocator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6Z4_CONWI
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADB52792.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_2082_curated_29
bacterium YEK0313, Bacteria

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28300..29349
DNA (1050bp) protein (350aa)
Inner-membrane translocator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6Z3_CONWI
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:CEJ12568.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_bf_inoc_scaffold_2082_curated_30
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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29370..31469
DNA (2100bp) protein (700aa)
Hydantoinase A/oxoprolinase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S973_RHIET
hydantoinase A/oxoprolinase protein
Hydantoinase A/oxoprolinase protein {ECO:0000313|EMBL:AGS26563.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Displaying items 1-30 of 31 in total

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