ggKbase home page

SCNpilot_bf_inoc_scaffold_1938_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1938_curated_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1843
DNA (1842bp) protein (614aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGK4_GEOOG
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_bf_inoc_scaffold_1938_curated_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1816..2838)
DNA (1023bp) protein (341aa)
Hydroxymethylpyrimidine ABC transporter substrate-binding component n=1 Tax=Patulibacter medicamentivorans RepID=H0E589_9ACTN
Hydroxymethylpyrimidine ABC transporter substrate-binding component {ECO:0000313|EMBL:EHN11150.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_1938_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2849..3616)
DNA (768bp) protein (256aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0Z5_CONWI
binding-protein-dependent transporters inner membrane component; K02050 NitT/TauT family transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB50071.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1938_curated_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3613..4440)
DNA (828bp) protein (276aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J8J9_FRASU
ABC transporter; K15600 putative hydroxymethylpyrimidine transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADP78442.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_bf_inoc_scaffold_1938_curated_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4537..5409
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E6V9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10600.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein; K07090
SCNpilot_bf_inoc_scaffold_1938_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5448..5906
DNA (459bp) protein (153aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F922_CONWI
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADB53017.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1938_curated_7
unknown

Not on your lists

comp(5921..6130)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1938_curated_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6197..7108)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATK0_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG05278.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_bf_inoc_scaffold_1938_curated_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7162..8499
DNA (1338bp) protein (446aa)
Sulfatase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATK1_RUBXD
sulfatase
Sulfatase {ECO:0000313|EMBL:ABG05277.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_bf_inoc_scaffold_1938_curated_10
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8465..9040)
DNA (576bp) protein (192aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DIP9_THEEB
Phosphoglycerate mutase {ECO:0000313|EMBL:BAC09084.1}; TaxID=197221 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
SCNpilot_bf_inoc_scaffold_1938_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9037..10467)
DNA (1431bp) protein (477aa)
VWA containing CoxE family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0Z7_CONWI
VWA containing CoxE family protein; K07161
VWA containing CoxE family protein {ECO:0000313|EMBL:ADB50073.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1938_curated_12
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10495..12078
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWI7_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN00561.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
SCNpilot_bf_inoc_scaffold_1938_curated_13
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12075..12827
DNA (753bp) protein (251aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AGD6_9ACTN
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAN00560.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
SCNpilot_bf_inoc_scaffold_1938_curated_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13359..14228)
DNA (870bp) protein (290aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0Z8_CONWI
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADB50074.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_bf_inoc_scaffold_1938_curated_15
unknown

Not on your lists

14252..14428
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 15 items

View Taxonomy