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SCNpilot_bf_inoc_scaffold_1316_curated_23

Organism: scnpilot_dereplicated_Solirubrobacterales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 20916..21473

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003704004 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 195.0
  • Bit_score: 182
  • Evalue 4.40e-43
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 195.0
  • Bit_score: 181
  • Evalue 1.80e-43
Tax=RBG_16_Deltaproteobacteria_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 192.0
  • Bit_score: 199
  • Evalue 3.70e-48

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Taxonomy

RBG_16_Deltaproteobacteria_71_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
TTGCGGGCGGGGGAGGAGGCGGCCTTCGTCGAGCTCGCCGGGCGCCACCAGGCGAGCATGCTGCGGCTCGCCTCGACCTTCGTGCCGAACGCGGCGGTCGCCGAGGAGGTGGTGCAGGACACCTGGGTCGCGGTCCTGCGCGGGATCGACCGCTTCGACGGGCGGGCGGCGTTCAAGACCTGGCTGCTGGCGATCCTCGTCAACCGGGCCAAGAGCACCGGCATCAGTGAGGCGCGGAGCCTGCCGATCGGCGACGCCGGCCCCGCGGTCGACGGCTCGCGCTTCGACGCGGGCGGCGCTTGGTCCTCACCGCCGCGCCACTGGATCGAGGAGAGCGAGGACCGGCTGCTGGCGAGCGGCCTGCGCGGGCGGCTGGAGTCGGCGCTGCGGAGGTTGCCGTCGCGGCAGCGGGCGATCGTCATCCTGCGCGATGTGGACGGCATGAGCAGCGAGGAGGTGTGCAGGGTGCTCGAGATCAGCGCGGGCAACCAGCGGGTGCTGCTCCACCGCGCCCGTTCCCACCTGCGCGCCGCGGTCGAGGGGTTCGTCGACGCATGA
PROTEIN sequence
Length: 186
LRAGEEAAFVELAGRHQASMLRLASTFVPNAAVAEEVVQDTWVAVLRGIDRFDGRAAFKTWLLAILVNRAKSTGISEARSLPIGDAGPAVDGSRFDAGGAWSSPPRHWIEESEDRLLASGLRGRLESALRRLPSRQRAIVILRDVDGMSSEEVCRVLEISAGNQRVLLHRARSHLRAAVEGFVDA*