ggKbase home page

SCNpilot_bf_inoc_scaffold_2358_curated_4

Organism: scnpilot_dereplicated_Solirubrobacterales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(3255..4361)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTA6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 338.0
  • Bit_score: 297
  • Evalue 1.40e-77
ABC transporter permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 338.0
  • Bit_score: 297
  • Evalue 4.50e-78
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA26324.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 338.0
  • Bit_score: 297
  • Evalue 2.00e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
TTGAATGTGCTAGCGAGCAAGCCCGTGGCGACAACCCCGACCGGTAAGCGCGGCGGCCGCTCGATCGCGATCAGCGAGTTCGTCACGCGCTACGGAGTCGTGATCGCCTGGCTGCTCGTGATCGGCGTCTTCTCCGCCCTGAAGCCACAGACTTTTGCCACCTGGGCGAACTTCCAGACGATCTTCGGATCCCAGTCGGTCCTGCTGATCCTCACCCTCGGCCTGGTCCTCTCGCTGTCGGTGGGAGAGCTTGATCTCTCGATCGCCGGCGTCATGGCGGTGGCCGTCGTCCTGGTCGGCCACCTCAACGTCACCCACCACGTGCCGGTGGTGCCGACGATCCTCATCGTCCTCCTGTTCGGGCTGCTCGCCGGCCTCGTCAACGCCTTCTTCGTCGTCGTGGTCGGGGTCGAGTCGATCGTCGTCACCCTGGGGATGGGCACCCTGTTGAGTGGCATCGCGGTCGCGATCAACGTCGAAACCGTCAGCGGCATCTCGGAAAGCCTCGTGAACGCGGTCCGCGGCCACCTCCTCGGCCTTCCGTACTCCTTCTGGTACGCGATCCTCCTGACGGTAATCGTCTGGTACCTCTTCAGCCTCACCCCACTCGGGAGGCGTATGCACTTCGTCAGGGTGGGACCTCAGGTGGCACGCCTCTCGGGCGTCAGGGTCGACAGGATCCGGGCCGGCGCGCTCGTCGCCACCAGCCTCATCGCGTCACTGGCGGGGATCGTCCAGGCCTCGCCGCTCGCCGCCTCGAGCCCGACCGTCAGCGCCGCGTACCTGCTTCCCGCGTTCTCGGCCGCCTTCCTCGGCTCGACCACGATCCAGCCCGGTCGGTTCAACGCCTGGGGCACTTTCGTAGGCGTCTACTTCCTCGTCACCGGCATCACCGGCCTCGAGCTCCTCGGTCTCTCCGGGTGGATCGAAAACGTCTTCTACGGCGGTTCGTTGGTGCTTGCCGTCGCCCTTTCGCGACTGGTCGCTCGCTATCAGCGTCGGCTGAAGATCAAAGAGGGACAACTAGGTGAGTCGGCATCCAAGCCGACCGCAGACACTCGGGCAGCAGGCGAGACCGCCCGCCTTCCCGGAGGAGAGGAGAGGTAA
PROTEIN sequence
Length: 369
LNVLASKPVATTPTGKRGGRSIAISEFVTRYGVVIAWLLVIGVFSALKPQTFATWANFQTIFGSQSVLLILTLGLVLSLSVGELDLSIAGVMAVAVVLVGHLNVTHHVPVVPTILIVLLFGLLAGLVNAFFVVVVGVESIVVTLGMGTLLSGIAVAINVETVSGISESLVNAVRGHLLGLPYSFWYAILLTVIVWYLFSLTPLGRRMHFVRVGPQVARLSGVRVDRIRAGALVATSLIASLAGIVQASPLAASSPTVSAAYLLPAFSAAFLGSTTIQPGRFNAWGTFVGVYFLVTGITGLELLGLSGWIENVFYGGSLVLAVALSRLVARYQRRLKIKEGQLGESASKPTADTRAAGETARLPGGEER*