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SCNpilot_bf_inoc_scaffold_224_curated

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_224_curated_1
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036E3004
transposase
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
SCNpilot_bf_inoc_scaffold_224_curated_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199..1413)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036F49A9
Permease {ECO:0000313|EMBL:AHX15344.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative permease
SCNpilot_bf_inoc_scaffold_224_curated_3
unknown

Not on your lists

comp(1459..1716)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_224_curated_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1713..2213)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI79254.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_224_curated_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..2627)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000317E519
Uncharacterized protein {ECO:0000313|EMBL:AHX15341.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2657..3295)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUN2_9GAMM
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:GAN45167.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phospholipid-binding protein, PBP family
SCNpilot_bf_inoc_scaffold_224_curated_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3368..4534)
DNA (1167bp) protein (389aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WLV3_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM00445.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glucose/sorbosone dehydrogenase
SCNpilot_bf_inoc_scaffold_224_curated_8

Not on your lists

comp(4616..6724)
DNA (2109bp) protein (703aa)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=mine drainage metagenome RepID=T1C5F7_9ZZZZ
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase {ECO:0000313|EMBL:EQD61345.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6808..7866)
DNA (1059bp) protein (353aa)
Putative hydrolase of the alpha/beta-hydrolase fold protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMJ6_9GAMM
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:EIL88437.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase of the alpha/beta-hydrolase fold protein
SCNpilot_bf_inoc_scaffold_224_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7863..8606)
DNA (744bp) protein (248aa)
Acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK4_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL97195.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_bf_inoc_scaffold_224_curated_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8720..9589
DNA (870bp) protein (290aa)
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1); K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1]
phenylalanine 4-monooxygenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D592
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:GAN45171.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_224_curated_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9857..11032)
DNA (1176bp) protein (392aa)
Nitroreductase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H1G1_XANCT
Dehydrogenase {ECO:0000313|EMBL:GAN45067.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
nitroreductase
SCNpilot_bf_inoc_scaffold_224_curated_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11124..11414
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45069.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_224_curated_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..14077)
DNA (2667bp) protein (889aa)
adenylate cyclase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3B305
Adenylate cyclase {ECO:0000313|EMBL:GAN45070.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14201..15265)
DNA (1065bp) protein (355aa)
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:GAN45071.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
signal transduction protein id=2693609 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
diguanylate cyclase
SCNpilot_bf_inoc_scaffold_224_curated_16
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15388..15957
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003687B11
Uncharacterized protein {ECO:0000313|EMBL:EJL88278.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15988..16743)
DNA (756bp) protein (252aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJX4_9GAMM
Acyltransferase {ECO:0000313|EMBL:GAN45078.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_bf_inoc_scaffold_224_curated_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16836..17255)
DNA (420bp) protein (140aa)
peptidyl-tRNA hydrolase n=1 Tax=Dyella japonica RepID=UPI000315522A
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AIF46529.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
protein chain release factor B
SCNpilot_bf_inoc_scaffold_224_curated_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17396..18154)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI79107.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18268..20244
DNA (1977bp) protein (659aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK09_9GAMM
SCNpilot_bf_inoc_scaffold_224_curated_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20449..21366
DNA (918bp) protein (306aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
SCNpilot_bf_inoc_scaffold_224_curated_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21463..22242)
DNA (780bp) protein (260aa)
Lipopolysaccharide core biosynthesis glycosyl transferase (KdtX) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDH6_9GAMM
Lipopolysaccharide core biosynthesis glycosyl transferase {ECO:0000313|EMBL:GAN44927.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycosyl transferase
SCNpilot_bf_inoc_scaffold_224_curated_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22232..23542)
DNA (1311bp) protein (437aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM
Polymerase {ECO:0000313|EMBL:GAN44928.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lipid A core-O-antigen ligase-like enyme
SCNpilot_bf_inoc_scaffold_224_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23708..24880)
DNA (1173bp) protein (391aa)
Glycosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG20_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL98411.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_224_curated_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24950..25171)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98412.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_224_curated_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25233..25928)
DNA (696bp) protein (232aa)
MgtC/SapB transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS21_9GAMM
MgtC/SapB transporter {ECO:0000313|EMBL:EIL90012.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MgtC family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_bf_inoc_scaffold_224_curated_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26018..26974
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD0AD
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KGI76671.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative nucleoside-diphosphate-sugar epimerase
SCNpilot_bf_inoc_scaffold_224_curated_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27588..30488)
DNA (2901bp) protein (967aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAV5_9GAMM
glutamine synthetase adenylyltransferase
SCNpilot_bf_inoc_scaffold_224_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30539..32470
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034848B6
Phosphoglycerol transferase {ECO:0000313|EMBL:EIL93960.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
SCNpilot_bf_inoc_scaffold_224_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32526..32792)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3R7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94108.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying items 1-30 of 113 in total

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