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SCNpilot_bf_inoc_scaffold_142_curated

Search features with annotation key words

Displaying items 121-150 of 289 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_142_curated_121
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153207..154331
DNA (1125bp) protein (375aa)
Putative regulator of cell autolysis n=1 Tax=Caulobacter sp. AP07 RepID=J3AQ46_9CAUL
signal transduction histidine kinase LytS
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_bf_inoc_scaffold_142_curated_122
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

154328..155092
DNA (765bp) protein (255aa)
two-component system response regulator protein; K02477 two-component system, LytT family, response regulator
lytT; sensory transduction protein lytT; K02477 two-component system, LytT family, response regulator id=24658805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sensory transduction protein lytT {ECO:0000313|EMBL:CBH25993.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
SCNpilot_bf_inoc_scaffold_142_curated_123
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155147..155650)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94424.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_124
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155786..156382)
DNA (597bp) protein (199aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB4_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI78438.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative outer membrane protein
SCNpilot_bf_inoc_scaffold_142_curated_125
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156634..158754)
DNA (2121bp) protein (707aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC77_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL97068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative metalloendopeptidase
SCNpilot_bf_inoc_scaffold_142_curated_126
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158845..162885
DNA (4041bp) protein (1347aa)
ATP-dependent helicase HrpA n=1 Tax=Rhodanobacter denitrificans RepID=M4NJG2_9GAMM
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AGG90242.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_142_curated_127
unknown

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comp(163065..163439)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_142_curated_128
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163572..164432)
DNA (861bp) protein (287aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Dyella japonica RepID=UPI0002D334C3
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAN45224.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_142_curated_129
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164429..166768)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7S8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45223.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Protein of unknown function (DUF1631)
SCNpilot_bf_inoc_scaffold_142_curated_130
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166892..167158)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360087E
Uncharacterized protein {ECO:0000313|EMBL:AIF47285.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_131
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167194..167754
DNA (561bp) protein (187aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dyella ginsengisoli RepID=UPI000348A19F
5-(carboxyamino)imidazole ribonucleotide mutase
SCNpilot_bf_inoc_scaffold_142_curated_132
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167855..169042
DNA (1188bp) protein (396aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleia
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
phosphoribosylaminoimidazole carboxylase n=1 Tax=Dyella japonica RepID=UPI0002FCCB83
SCNpilot_bf_inoc_scaffold_142_curated_133
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169102..170895
DNA (1794bp) protein (598aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACX94892.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACX94892.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Gamma-glutamyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVW5_HALNC
SCNpilot_bf_inoc_scaffold_142_curated_134
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170954..171289
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J3M8_9GAMM
hypothetical protein
Tax=DS1215_Halomonas_54_146
SCNpilot_bf_inoc_scaffold_142_curated_135
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171286..171576
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00036857E6
XRE family transcriptional regulator {ECO:0000313|EMBL:KFF47923.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
XRE family transcriptional regulator; K07726 putative transcriptional regulator
SCNpilot_bf_inoc_scaffold_142_curated_136
unknown

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171600..171728
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_142_curated_137
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(172252..172977)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036B456B
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
SCNpilot_bf_inoc_scaffold_142_curated_138
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173312..174154)
DNA (843bp) protein (281aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE2_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIL87333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative metal-dependent membrane protease
SCNpilot_bf_inoc_scaffold_142_curated_139
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174212..177946)
DNA (3735bp) protein (1245aa)
Pathogenicity protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC79_9GAMM
Pathogenicity protein {ECO:0000313|EMBL:EIL97070.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_140
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178088..179854)
DNA (1767bp) protein (589aa)
Surface antigen (D15) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45993.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
outer membrane protein
SCNpilot_bf_inoc_scaffold_142_curated_141
unknown

Not on your lists

comp(179851..180045)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_142_curated_142
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180309..183083)
DNA (2775bp) protein (925aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY3_9GAMM
Putative Beta-(1-3)-glucosyl transferase {ECO:0000313|EMBL:EIL91374.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
exo-beta-1,3-glucanase
SCNpilot_bf_inoc_scaffold_142_curated_143
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183178..183981
DNA (804bp) protein (268aa)
N-formylglutamate amidohydrolase; K01458 N-formylglutamate deformylase [EC:3.5.1.68]
N-formylglutamate amidohydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV44_PSEUU
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KGI77626.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_142_curated_144
unknown

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comp(183966..184397)
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_142_curated_145
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184448..184921)
DNA (474bp) protein (158aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G9F7_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK41218.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_bf_inoc_scaffold_142_curated_146
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184918..185217)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037FF4CD
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP81067.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_bf_inoc_scaffold_142_curated_147
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185369..185797)
DNA (429bp) protein (143aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN50906.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
putative translation initiation inhibitor, yjgF family
SCNpilot_bf_inoc_scaffold_142_curated_148
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185794..187248)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_142_curated_149
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187320..187973)
DNA (654bp) protein (218aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV66_PSEUP
SCNpilot_bf_inoc_scaffold_142_curated_150
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188127..189575)
DNA (1449bp) protein (483aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKV5_9GAMM
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM00097.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
NAD-dependent aldehyde dehydrogenase
Displaying items 121-150 of 289 in total

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