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SCNpilot_bf_inoc_scaffold_142_curated

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Displaying items 1-30 of 289 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_142_curated_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198..578)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EB6D3
Glyoxalase {ECO:0000313|EMBL:AIF47591.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(656..2335)
DNA (1680bp) protein (560aa)
aminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034A12BC
Aminopeptidase {ECO:0000313|EMBL:GAN45059.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative aminopeptidase
SCNpilot_bf_inoc_scaffold_142_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2702..4498
DNA (1797bp) protein (599aa)
Coagulation factor 5/8 type domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE07_9GAMM
Coagulation factor 5/8 type domain-containing protein {ECO:0000313|EMBL:EIL97698.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
coagulation factor 5/8 type domain-containing protein
SCNpilot_bf_inoc_scaffold_142_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4535..7255)
DNA (2721bp) protein (907aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE11_9GAMM
pyruvate dehydrogenase E1 component, homodimeric type
SCNpilot_bf_inoc_scaffold_142_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..9651)
DNA (2400bp) protein (800aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:EIL97703.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EIL97703.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE12_9GAMM
malic enzyme
SCNpilot_bf_inoc_scaffold_142_curated_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9804..11498
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036B8E78
Diguanylate cyclase {ECO:0000313|EMBL:GAN45499.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_bf_inoc_scaffold_142_curated_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11529..12314
DNA (786bp) protein (262aa)
amn; AMP nucleosidase (EC:3.2.2.4); K01241 AMP nucleosidase [EC:3.2.2.4] rbh
AMP nucleosidase {ECO:0000313|EMBL:KIJ71558.1}; EC=3.2.2.4 {ECO:0000313|EMBL:KIJ71558.1};; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
AMP nucleosidase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AF04_LEIXX
SCNpilot_bf_inoc_scaffold_142_curated_8
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12625..13062
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6HJI5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ45187.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13253..14719
DNA (1467bp) protein (489aa)
cytochrome oxidase subunit I n=1 Tax=Dyella ginsengisoli RepID=UPI000347200A
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIM03787.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c oxidase, cbb3-type, subunit I
SCNpilot_bf_inoc_scaffold_142_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14836..15495
DNA (660bp) protein (220aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W724_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL95265.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c oxidase, cbb3-type, subunit II
SCNpilot_bf_inoc_scaffold_142_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15492..15686
DNA (195bp) protein (65aa)
Cytochrome c oxidase subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWE3_9GAMM
Cbb3-type cytochrome oxidase component FixQ
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_142_curated_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..16594
DNA (912bp) protein (304aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Rhodanobacter sp. 115 RepID=I4WWE2_9GAMM
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c oxidase, cbb3-type, subunit III
SCNpilot_bf_inoc_scaffold_142_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16569..16790
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W721_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95262.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16787..19015
DNA (2229bp) protein (743aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWE0_9GAMM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIM03782.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
heavy metal translocating P-type ATPase
SCNpilot_bf_inoc_scaffold_142_curated_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19012..19230
DNA (219bp) protein (73aa)
Cbb3-type cytochrome oxidase maturation protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWD9_9GAMM
Cbb3-type cytochrome oxidase maturation protein {ECO:0000313|EMBL:EIM03781.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome oxidase maturation protein, cbb3-type
SCNpilot_bf_inoc_scaffold_142_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19418..20869
DNA (1452bp) protein (484aa)
Cytochrome-c oxidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ51_9GAMM
Cytochrome-c oxidase {ECO:0000313|EMBL:EIM01593.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Cbb3-type cytochrome oxidase subunit 1
SCNpilot_bf_inoc_scaffold_142_curated_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20866..21855
DNA (990bp) protein (330aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF0_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL90491.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cbb3-type cytochrome oxidase, cytochrome c subunit
SCNpilot_bf_inoc_scaffold_142_curated_18
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21866..22030
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVC2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63728.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_bf_inoc_scaffold_142_curated_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22042..22506
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90490.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22496..24343)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BFA38
Potassium transporter TrkA {ECO:0000313|EMBL:GAN45349.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
di-/tricarboxylate transporter
SCNpilot_bf_inoc_scaffold_142_curated_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24359..25267)
DNA (909bp) protein (303aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE504
SCNpilot_bf_inoc_scaffold_142_curated_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25320..26135)
DNA (816bp) protein (272aa)
Thiazole synthase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQ93_PSEUU
thiazole biosynthesis protein; K03149 thiamine biosynthesis ThiG
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_142_curated_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26375..26575)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000318E4BE
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AIF46862.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein
SCNpilot_bf_inoc_scaffold_142_curated_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26624..29128)
DNA (2505bp) protein (835aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DCF17E
Uncharacterized protein {ECO:0000313|EMBL:AHX15862.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative prolin-rich exported protein
SCNpilot_bf_inoc_scaffold_142_curated_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29583..30458
DNA (876bp) protein (292aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ribosomal protein S6 modification protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B328C
alpha-L-glutamate ligase; K05844 ribosomal protein S6 modification protein
SCNpilot_bf_inoc_scaffold_142_curated_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30613..31167
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E59E19
Uncharacterized protein {ECO:0000313|EMBL:AHX16484.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_bf_inoc_scaffold_142_curated_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31259..31657
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B977C
Uncharacterized protein {ECO:0000313|EMBL:GAN45341.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31654..33330
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034956A7
Uncharacterized protein {ECO:0000313|EMBL:AHX16061.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
TonB domain/peptidase M56 domain-containing protein
SCNpilot_bf_inoc_scaffold_142_curated_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33410..34096
DNA (687bp) protein (229aa)
XRE family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003478B5E
XRE family transcriptional regulator {ECO:0000313|EMBL:GAN45340.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_bf_inoc_scaffold_142_curated_30
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34080..35378
DNA (1299bp) protein (433aa)
histidine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI0003484533
Histidine kinase {ECO:0000313|EMBL:KJV37279.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
signal transduction histidine kinase
Displaying items 1-30 of 289 in total

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