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SCNpilot_bf_inoc_scaffold_142_curated

Search features with annotation key words

Displaying items 61-90 of 289 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_142_curated_61
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70994..71563)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D26AB0
Uncharacterized protein {ECO:0000313|EMBL:AIF47187.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
YGGT family protein
SCNpilot_bf_inoc_scaffold_142_curated_62
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71560..72417)
DNA (858bp) protein (286aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBI4_9GAMM
pyrroline-5-carboxylate reductase
SCNpilot_bf_inoc_scaffold_142_curated_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72486..75605)
DNA (3120bp) protein (1040aa)
Rnd superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJQ6_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:KGI79036.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cation/multidrug efflux pump
SCNpilot_bf_inoc_scaffold_142_curated_64
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75613..78831)
DNA (3219bp) protein (1073aa)
Acriflavin resistance protein D n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJQ7_9GAMM
Acriflavine resistance protein B {ECO:0000313|EMBL:KGI79035.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cation/multidrug efflux pump
SCNpilot_bf_inoc_scaffold_142_curated_65
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78851..80155)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345FC09
RND family efflux transporter, MFP subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_142_curated_66

Not on your lists

comp(80325..81854)
DNA (1530bp) protein (510aa)
Tripeptide transporter permease n=2 Tax=mine drainage metagenome RepID=T0ZPX1_9ZZZZ
Tripeptide transporter permease {ECO:0000313|EMBL:EQD30754.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
SCNpilot_bf_inoc_scaffold_142_curated_67
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82092..82910
DNA (819bp) protein (273aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Q8_9GAMM
SCNpilot_bf_inoc_scaffold_142_curated_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82917..84530
DNA (1614bp) protein (538aa)
thiamine monophosphate synthase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZF4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92595.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_bf_inoc_scaffold_142_curated_69
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84613..85233)
DNA (621bp) protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9DCD1
dephospho-CoA kinase
SCNpilot_bf_inoc_scaffold_142_curated_70
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85267..86997)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E068F
Putative membrane-associated, metal-dependent hydrolase {ECO:0000313|EMBL:EGM76180.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_71
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87064..87888)
DNA (825bp) protein (275aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMA8_9GAMM
SCNpilot_bf_inoc_scaffold_142_curated_72
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88080..89351)
DNA (1272bp) protein (424aa)
Type IV pilus biogenesis protein PilC n=1 Tax=mine drainage metagenome RepID=T1B5T3_9ZZZZ
Type II secretory pathway protein {ECO:0000313|EMBL:KGI77255.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
type II secretory pathway, component PulF
SCNpilot_bf_inoc_scaffold_142_curated_73
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89519..91249)
DNA (1731bp) protein (577aa)
type II secretory protein GspE n=1 Tax=Dyella japonica RepID=UPI0003124CC9
General secretion pathway protein GspE {ECO:0000313|EMBL:GAN45262.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV-A pilus assembly ATPase PilB
SCNpilot_bf_inoc_scaffold_142_curated_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91828..92727
DNA (900bp) protein (300aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCZ1_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:GAN45260.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_142_curated_75
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92778..93008
DNA (231bp) protein (77aa)
Prevent-host-death family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW4_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EIL92755.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
prevent-host-death family protein
SCNpilot_bf_inoc_scaffold_142_curated_76
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93005..93391
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92754.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_77
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93435..94796
DNA (1362bp) protein (454aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCG2_9GAMM
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL97153.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_142_curated_78
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94955..95656
DNA (702bp) protein (234aa)
Methyltransferase type 11 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E3M6_9GAMM
Methyltransferase type 11 {ECO:0000313|EMBL:EGZ48496.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
SAM-dependent methyltransferase
SCNpilot_bf_inoc_scaffold_142_curated_79
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95653..96666
DNA (1014bp) protein (338aa)
Glycosyltransferase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GSC3_9GAMM
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAO37042.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_142_curated_80
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

96734..97897
DNA (1164bp) protein (388aa)
hypothetical protein GobsU_31114 id=5091041 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP40279.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
SCNpilot_bf_inoc_scaffold_142_curated_81
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97956..99398)
DNA (1443bp) protein (481aa)
polysaccharide biosynthesis protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B469E4
Uncharacterized protein {ECO:0000313|EMBL:KFN43129.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
polysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_142_curated_82
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100485..101135)
DNA (651bp) protein (217aa)
Hexapeptide repeat-containing transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCY9_9GAMM
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:EIL97330.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
SCNpilot_bf_inoc_scaffold_142_curated_83
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101132..102259)
DNA (1128bp) protein (376aa)
Glutamate--GDP-4-keto-6-deoxy-D-mannose aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCY8_9GAMM
Glutamate--GDP-4-keto-6-deoxy-D-mannose aminotransferase {ECO:0000313|EMBL:EIL97329.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
rfbE; glutamate--GDP-4-keto-6-deoxy-D-mannose aminotransferase
SCNpilot_bf_inoc_scaffold_142_curated_84
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102256..103479)
DNA (1224bp) protein (408aa)
SAM-dependent methyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6D731
C-methyltransferase {ECO:0000313|EMBL:EIL97328.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
C-methyltransferase
SCNpilot_bf_inoc_scaffold_142_curated_85
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103476..104036)
DNA (561bp) protein (187aa)
DTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
DTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VN51_9GAMM
DTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBL46243.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_bf_inoc_scaffold_142_curated_86
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104024..105118)
DNA (1095bp) protein (365aa)
ddhB; CDP-glucose-4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
CDP-glucose 4,6-dehydratase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B61F8A
Uncharacterized protein {ECO:0000313|EMBL:KFN43123.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_142_curated_87
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105100..105870)
DNA (771bp) protein (257aa)
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCY4_9GAMM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:EIL97325.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_bf_inoc_scaffold_142_curated_88
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(105989..107230)
DNA (1242bp) protein (414aa)
ATPase AAA n=1 Tax=Rhizobium mongolense RepID=UPI0003B63198
ATPase (AAA+ superfamily)like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_bf_inoc_scaffold_142_curated_89
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107701..110277)
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L552_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:AHX12278.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_142_curated_90
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110313..112538)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WIX9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97321.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
Displaying items 61-90 of 289 in total

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