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SCNpilot_bf_inoc_scaffold_113_curated

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Displaying items 1-30 of 315 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_113_curated_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4422..4892
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV29350.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_2
unknown

Not on your lists

comp(4796..5023)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_113_curated_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5162..5359)
DNA (198bp) protein (66aa)
rubredoxin n=1 Tax=Dyella japonica RepID=UPI0002FFFBA0
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Rubredoxin-type Fe(Cys)4 protein
SCNpilot_bf_inoc_scaffold_113_curated_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5452..6108
DNA (657bp) protein (219aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonic
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000304B5C8
thiamine-phosphate pyrophosphorylase
SCNpilot_bf_inoc_scaffold_113_curated_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6105..7475
DNA (1371bp) protein (457aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=mine drainage metagenome RepID=T0ZVV8_9ZZZZ
glutamate-1-semialdehyde-2,1-aminomutase
SCNpilot_bf_inoc_scaffold_113_curated_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7483..7905)
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Dyella ginsengisoli RepID=UPI000349F38D
Glyoxalase {ECO:0000313|EMBL:GAN44915.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lactoylglutathione lyase-like lyase
SCNpilot_bf_inoc_scaffold_113_curated_7
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7993..9111
DNA (1119bp) protein (373aa)
cystathionine gamma-synthase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36B01
Uncharacterized protein {ECO:0000313|EMBL:KFN42469.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
SCNpilot_bf_inoc_scaffold_113_curated_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9411..9941
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CNH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KGI76647.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9953..10588
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F66A9D
Uncharacterized protein {ECO:0000313|EMBL:KGI76648.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10615..11778
DNA (1164bp) protein (388aa)
adhesin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F90F8
Adhesin {ECO:0000313|EMBL:AHY58244.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Large exoproteins involved in heme utilization or adhesion
SCNpilot_bf_inoc_scaffold_113_curated_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12591
DNA (711bp) protein (237aa)
Bacteriocin resistance protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TLK0_STEMA
Peptidase {ECO:0000313|EMBL:KGI76649.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
peptidase C39 bacteriocin processing
SCNpilot_bf_inoc_scaffold_113_curated_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12610..13425
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00038238BA
NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96216.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13520..14902
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EWR0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KKD57279.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14911..16434)
DNA (1524bp) protein (508aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=mine drainage metagenome RepID=T1B892_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI76808.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_bf_inoc_scaffold_113_curated_15
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16545..17258)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DB0FBC
Uncharacterized protein {ECO:0000313|EMBL:KGM54583.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17277..17939)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DDA729
Uncharacterized protein {ECO:0000313|EMBL:AHX15316.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_113_curated_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18075..18665)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003478DA2
Peptidase S16 {ECO:0000313|EMBL:GAN44917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase S16, lon domain protein
SCNpilot_bf_inoc_scaffold_113_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18675..20186)
DNA (1512bp) protein (504aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W390_9GAMM
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:EIL93931.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
SCNpilot_bf_inoc_scaffold_113_curated_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20183..20743)
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN44919.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_113_curated_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20746..21315)
DNA (570bp) protein (190aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiiba
adenylate kinase-like kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ1_9GAMM
SCNpilot_bf_inoc_scaffold_113_curated_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21430..22716
DNA (1287bp) protein (429aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japon
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=Dyella japonica RepID=UPI00030CD132
SCNpilot_bf_inoc_scaffold_113_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22805..23629)
DNA (825bp) protein (275aa)
2-methylisocitrate lyase n=1 Tax=Variovorax paradoxus RepID=UPI000367FA0F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99220.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_113_curated_23
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23789..25873
DNA (2085bp) protein (695aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
pyrophosphatase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EDD2D
vacuolar-type H(+)-translocating pyrophosphatase
SCNpilot_bf_inoc_scaffold_113_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26013..28136
DNA (2124bp) protein (708aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDF8_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97499.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
serine protease, S9A family peptidase
SCNpilot_bf_inoc_scaffold_113_curated_25
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28183..28656)
DNA (474bp) protein (158aa)
Sugar-specific transcriptional regulator, TrmB family n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3VAA2_9LEPT
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EPG73390.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
MarR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_113_curated_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28718..29962
DNA (1245bp) protein (415aa)
monooxygenase (EC:1.14.13.-); K00480 salicylate hydroxylase [EC:1.14.13.1]
Salicylate hydroxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAH7_9BRAD
Monooxygenase {ECO:0000313|EMBL:KJC35979.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_bf_inoc_scaffold_113_curated_27
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29991..30539
DNA (549bp) protein (183aa)
ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DEA77
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_113_curated_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30758..32224
DNA (1467bp) protein (489aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Pyruvate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D5_9GAMM
pyruvate kinase
SCNpilot_bf_inoc_scaffold_113_curated_29
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32224..32661
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D2A32
Energy transducer TonB {ECO:0000313|EMBL:AIF49405.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TonB family protein
SCNpilot_bf_inoc_scaffold_113_curated_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32738..33748
DNA (1011bp) protein (337aa)
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
alf1; Fructose-bisphosphate aldolase class I (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Fructose-bisphosphate aldolase class-I n=1 Tax=mine drainage metagenome RepID=T1BDS3_9ZZZZ
Displaying items 1-30 of 315 in total

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