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SCNpilot_bf_inoc_scaffold_1975_curated_9

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 8770..12987

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 999.99
  • Bit_score: 2351
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta''; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 999.99
  • Bit_score: 2332
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Dyella ginsengisoli RepID=UPI0003455CD3 similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4218
ATGAAAGACCTTCTGAACCTGTTCAACCAGCAGTCGCAGCCGCTCAACTTCGATGCGATCAAGATCTCGCTGGCCTCGCCCGACCTGATCCGCTCGTGGTCGTGGGGCGAAGTGAAGAAACCCGAAACCATCAATTACCGCACCTTCAAGCCGGAACGCGATGGCCTGTTCTGCGCCGCGATCTTCGGCCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGCACCGCGGCGTGGTCTGCGAGAAGTGCGGCACCGAGGTGACGCTGGCGAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCAGCCCGACAGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCATCGGCCTGATGCTGGACATGACGCTGCGCGACATCGAGCGCATCCTGTACTTCGAAGCCTACGTCGTGATCGACCCGGGCCTGACCCCGCTCGAACGCGGCCAGATGCTGACCGAAGACCAGTACCTCACCGCGGTCGAGGAACACGGTGACGAGTTCGACGCGCGCATGGGCGCCGAGGCGGTCTACGAGTTGCTGAAGTCGCTGGACCTCAACGGCGAAATGGTGCGGCTGAAGGAAGAGATCGCCTCCACCAATTCCGAAACCAAGCTGAAGCGGCTGACCAAGCGCATCAAGCTGGTCGAGGCCTTCATCGAATCGGGCAACCGTCCGGAGTGGATGGTGATGACGGTGCTGCCGGTGCTGCCGCCGGACCTGCGTCCGCTGGTACCGCTGGAAGGCGGCCGCTTCGCGACCTCGGACTTGAACGACCTGTACCGCCGCGTGATCAACCGCAACAACCGCCTGCGCCGGCTGCTGGAACTCAACGCGCCCGACATCATCGTGCGCAACGAGAAACGCATGTTGCAGGAATCGGTCGATGCTTTGATGGACAACGGCCGTCGCGGCCGTGCCATCACCGGCACCAACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGCTCGGTGATCACCGTGGGCCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTGGAACTGTTCAAGCCCTTCATCTTCTCCAAGCTGCAGTTGCGCGGCATCGCGCCGACCATCAAGGCGGCGAAGAAATCGGTCGAGCGCGAGGAACCCGTTGTGTGGGACATCCTCGAAGAGGTGATCCGCGAACATCCGGTGTTGCTGAACCGCGCGCCGACCCTGCATCGCCTGGGCATCCAGGCGTTCGAGCCCAAGCTGATCGAAGGCAAGGCCATCCAGCTGCATCCGCTGGTCTGCACCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGCTGGAAGCGCAGCTGGAAGCGCGCGCGCTGATGATGTCCACCAACAACATCCTCAGCCCCGCCAACGGCGAACCCATCATCGTGCCGACCCAGGACGTGGTGCTGGGCCTGTACTACATGACCCGCGAGCTGGCCGGTGCCAGGGGCGAGGGCATGGCGTTCGCCGACGTGGCCGAAGTGCGTCGCGCCTACGAAAGCAAGTCGGTCGAATTGCACGCCAAGGTCAAGGTGCGCATCCGCGAGGTCGACATCGCGGCCGACGGTTCGCGCAAGGACAAGGTCACGCTCACCGACACCACCGTCGGTCGAGCGTTGCTGGCCGAGATCCTGCCTGAAGGCCTGGCCTTCCGGCGCATGAACACCGAGCTGACCAAGAAGGCGATCTCCAAGCTCATCAACGCCTGCTATCGCGAGCTGGGACTCAAGGACACCGTGGTGTTCGCCGACCAGCTGATGTACACCGGCTACCGCTTCGCCACGATCTCGGGCATCTCGATCGGCATCGACGACATGAAGATCCCGGACGAGAAGAAGGGCATCCTCGAAGAGGCCGAAAAGGAAGTCGTCGAAATCCAGGAACAGTTCCAGTCGGGTCTCGTGACTGCCGGTGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACCAACGAGCAGATCGCCGCGGCGATGATGAAGGGCATCGGTTTCGACAAGGTCAAGGGCGCCGACGGAAAGGTCCACGAACAGAAGTCGATGAACTCGATCTACATCATGGCCGATTCCGGCGCGCGCGGTTCCGCGGCGCAGATCCGCCAGCTGGCCGGGATGCGCGGCCTGATGGCCAAGCCGGACGGTTCGATCATCGAGACGCCGATCAAGGCCAACTTCCGCGAAGGCCTGGACGTGCTGCAGTACTTCATCTCCACCCACGGCGCGCGCAAGGGCCTGGCCGACACCGCGTTGAAGACCGCGAACTCGGGCTACCTGACCCGCCGCCTGGTCGACGTGGCCCAGGACGTGGTGGTGACCGAGCACGATTGCGGTACCCACGAAGGCCTGATGATGACCTCCATCGTGGAAGGCGGCGACGTGGTCGAACCGCTGCGCGAGCGCGTGCTCGGCCGCGTGGCGGTCGAGGACGTGTACGCGCCGGGCGACGACGACAAGCCGATCGTCACGCGCGACACGCTGCTCAACGAAGCCATGGTCGACAAGCTGGATGCGGCCGGCGTGCAGAGCGTCAAGGTGCGCTCGCCGATTTCCTGCGAATCCGAGTTCGGCGTGTGCGCGCTGTGCTACGGGCGCGATCTGGCGCGCGGGCATATCGTCAACATCGGCGAGGCGGTCGGCGTGATCGCGGCGCAGTCGATTGGCGAGCCCGGTACGCAGCTGACGATGCGCACGTTCCACATCGGTGGCGCGGCTTCGCGTGCGGCGGCGGTGGACAACGTGACCATCAAGACCACCGGCACCCTGAAGTTCAACAACCTCAAGACCGTGAAGCACGCGCAGGGCCATTTGGTCGCGGTGTCGCGTTCCGGCGACGTCAGCCTGATCGACGTCAACGGCCGCGAGCGCGAGCGCTACAAGGTGCCGTACGGCGCCACCATCACCGTCAAGGACGGAGCCGAGGTCAAGGCCGGCCAGACCGTTGCCACGTGGGATCCCCACACCCACCCGATCGTCACCGAGGTGGCGGGCCGCGTCAGGTACATCGACTTCGTGGACGGCGTGACAGTGCAGTCCTCGATCGACGAGCTGACAGGTCTCGAGAGCGTGGTGGTCACCGACCCGAAGCGCCGCGGCAGCAATGCCAAGGACCTGCGTCCGGCGGTGCGCCTGGAAGACAAGAAGGGCCAGGACCTCAAGCTGCCCGGCACCGACATCCCGGCGCAGTCGTATCTGCCGGCCGGCGCGATCGTGTCGATCCAGGACGGCGCCGAAGTGGGCGTCGGCGACGTCATCGCGCGCATCCCGCAGGAGTCGTCCAAGACCCGCGACATCACCGGCGGCCTGCCGCGCGTCGCGGATCTGTTCGAGGCCCGCAAGCCCAAGGAGCCGGCCATCCTCGCCGAGGTCTCGGGCGTGGTCAGCTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGATCATCAAGGACGCCGACGGCAACGAGCACGAGGACCTGATCCCGAAGTGGCGCCACATCGTGGTGTTCGAGGGCGAGCACGTCGAGAAGGGCGAAACCGTGGTGGATGGCGAGTCCGATCCGCGCGACATCCTGCGCCTGCTCGGCGTCGAGCGGCTCGCGGCTTACCTGGTCAAGGAAATCCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGCGATCATCCGCCAGATGTTGCGCAAGGTCGAGGTCAGCGAGCCCGGCGACACCACCTACCTGCGCGGCGAGCAGGTCGAACGCAACCAGTTCGACGAGGTCAACCGCAAGGCCGAAGCCCGCAACGAACATCCGGCGCAAGGGATCCCGGTGTTGCTGGGCATCACCAAGGCCTCGCTGGCGACCGAGTCGTTCATTTCGGCGGCGTCGTTCCAGGAGACCACGCGCGTCCTCACCGATGCCGCGGTACGCGGCAAGCGCGACGACTTGCGCGGCCTCAAGGAAAACGTTATAGTTGGCCGCTTGATTCCCGCTGGCACGGGCCTCGCCTACCACGCCCAGCGCAAGACGTCGGTGGGTTTGACCGACGCGGAAATGGAAACCCTGGCCAACGTATCCGCGGTGTTCGAAGAGGCCGGCGAGGCCCCGAGCGAAGCGCCGCAGTCGGCGACTTGA
PROTEIN sequence
Length: 1406
MKDLLNLFNQQSQPLNFDAIKISLASPDLIRSWSWGEVKKPETINYRTFKPERDGLFCAAIFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSLPSRIGLMLDMTLRDIERILYFEAYVVIDPGLTPLERGQMLTEDQYLTAVEEHGDEFDARMGAEAVYELLKSLDLNGEMVRLKEEIASTNSETKLKRLTKRIKLVEAFIESGNRPEWMVMTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQESVDALMDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKKMALELFKPFIFSKLQLRGIAPTIKAAKKSVEREEPVVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMSTNNILSPANGEPIIVPTQDVVLGLYYMTRELAGARGEGMAFADVAEVRRAYESKSVELHAKVKVRIREVDIAADGSRKDKVTLTDTTVGRALLAEILPEGLAFRRMNTELTKKAISKLINACYRELGLKDTVVFADQLMYTGYRFATISGISIGIDDMKIPDEKKGILEEAEKEVVEIQEQFQSGLVTAGERYNKVVDIWSRTNEQIAAAMMKGIGFDKVKGADGKVHEQKSMNSIYIMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLDVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVVTEHDCGTHEGLMMTSIVEGGDVVEPLRERVLGRVAVEDVYAPGDDDKPIVTRDTLLNEAMVDKLDAAGVQSVKVRSPISCESEFGVCALCYGRDLARGHIVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTIKTTGTLKFNNLKTVKHAQGHLVAVSRSGDVSLIDVNGRERERYKVPYGATITVKDGAEVKAGQTVATWDPHTHPIVTEVAGRVRYIDFVDGVTVQSSIDELTGLESVVVTDPKRRGSNAKDLRPAVRLEDKKGQDLKLPGTDIPAQSYLPAGAIVSIQDGAEVGVGDVIARIPQESSKTRDITGGLPRVADLFEARKPKEPAILAEVSGVVSFGKDTKGKQRLIIKDADGNEHEDLIPKWRHIVVFEGEHVEKGETVVDGESDPRDILRLLGVERLAAYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKVEVSEPGDTTYLRGEQVERNQFDEVNRKAEARNEHPAQGIPVLLGITKASLATESFISAASFQETTRVLTDAAVRGKRDDLRGLKENVIVGRLIPAGTGLAYHAQRKTSVGLTDAEMETLANVSAVFEEAGEAPSEAPQSAT*