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SCNpilot_bf_inoc_scaffold_778_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_778_curated_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..731
DNA (729bp) protein (243aa)
Transposase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBT0_9GAMM
Transposase {ECO:0000313|EMBL:EIT71345.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
integrase catalytic subunit
SCNpilot_bf_inoc_scaffold_778_curated_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

724..1530
DNA (807bp) protein (269aa)
IstB-like ATP-binding protein n=2 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZJ16_9GAMM
IstB-like ATP-binding protein {ECO:0000313|EMBL:EIT71909.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
IstB domain-containing protein ATP-binding protein
SCNpilot_bf_inoc_scaffold_778_curated_3
unknown

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comp(2439..2771)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_4
unknown

Not on your lists

3743..4606
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_5
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4735..6126)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YTF6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EYR68620.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_778_curated_6

Not on your lists

comp(6211..7071)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96679.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7093..7986)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens EGD-AQ6 RepID=U1SQJ5_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:ERH48526.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7983..9404)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMT5_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94322.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_bf_inoc_scaffold_778_curated_9
unknown

Not on your lists

comp(9525..9776)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9952..10497)
DNA (546bp) protein (182aa)
Orf22 n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U2S7_STEMA
Orf22 {ECO:0000313|EMBL:EMI50278.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_11
unknown

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comp(10499..11524)
DNA (1026bp) protein (342aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_12
unknown

Not on your lists

12016..12105
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_13
unknown

Not on your lists

12158..12280
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_14
unknown

Not on your lists

12277..12960
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13039..14172
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Pseudomonas tolaasii RepID=UPI0002E1A530
Uncharacterized protein {ECO:0000313|EMBL:CDX46251.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14761..15243)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XYJ7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44609.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_bf_inoc_scaffold_778_curated_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15365..15679)
DNA (315bp) protein (105aa)
UPF0060 membrane protein NT2_06_02200 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM57_9SPHN
UPF0060 membrane protein NI18_00395 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein; K09771 hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_18
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15688..16122)
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH17_9BRAD
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:BAM93112.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_bf_inoc_scaffold_778_curated_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16213..16578
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELZ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05764.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_20
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16575..16925
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Marinobacter RepID=H8W7K2_MARHY
Uncharacterized protein {ECO:0000313|EMBL:KFN46193.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_778_curated_21
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16990..18219)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000370B9EB
chrA; chromate transporter
Chromate transporter {ECO:0000313|EMBL:CCJ05867.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_bf_inoc_scaffold_778_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18285..18938)
DNA (654bp) protein (218aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NCR4_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG88454.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_778_curated_23
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19291..19689)
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=2988822 bin=GWF1_Xanthomonadales_69_6 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_778_curated_24
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19682..20011)
DNA (330bp) protein (110aa)
Uncharacterized protein id=2988826 bin=GWF1_Xanthomonadales_69_6 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Heavy metal transport/detoxification protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_778_curated_25
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20024..20674)
DNA (651bp) protein (217aa)
Uncharacterized protein id=2988828 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_778_curated_26
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21260..21508)
DNA (249bp) protein (83aa)
Carbon storage regulator homolog n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACW6_9GAMM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
csrA1; carbon storage regulator
SCNpilot_bf_inoc_scaffold_778_curated_27
unknown

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comp(21660..22580)
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_778_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23218..23496
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CS31_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EWC39944.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
SCNpilot_bf_inoc_scaffold_778_curated_29
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23532..24617)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F94015
Uncharacterized protein {ECO:0000313|EMBL:AJC46373.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
LuxR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_778_curated_30
unknown

Not on your lists

24728..25054
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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