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SCNpilot_bf_inoc_scaffold_66_curated

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Displaying items 91-120 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_66_curated_91
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(110910..113246)
DNA (2337bp) protein (779aa)
Collagenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ8_9GAMM
Collagenase {ECO:0000313|EMBL:EIL92439.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S1A family peptidase
SCNpilot_bf_inoc_scaffold_66_curated_92
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113484..114245
DNA (762bp) protein (254aa)
Transcriptional regulator, AraC family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZ36_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:AKF84782.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_66_curated_93
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114324..115091
DNA (768bp) protein (256aa)
Molybdate-binding periplasmic protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SY82_XANCT
Molybdenum ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKC86069.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
modA; molybdate-binding periplasmic protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_66_curated_94
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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115098..115781
DNA (684bp) protein (228aa)
Molybdate ABC importer permease component n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZI33_XANCT
Molybdate ABC importer permease component {ECO:0000313|EMBL:EKU26273.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
modB; molybdate ABC transporter permease; K02018 molybdate transport system permease protein
SCNpilot_bf_inoc_scaffold_66_curated_95
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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115778..116443
DNA (666bp) protein (222aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
molybdate ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum transport ATP-binding protein ModC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R4L7_9RHOB
SCNpilot_bf_inoc_scaffold_66_curated_96
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(116458..117711)
DNA (1254bp) protein (418aa)
Putative transmembrane sensor protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4X6_AZOSB
putative transmembrane sensor protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SCNpilot_bf_inoc_scaffold_66_curated_97
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117848..118981)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DCEE6
Inorganic phosphate transporter {ECO:0000313|EMBL:EYR70386.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
phosphate/sulfate permease; K03306 inorganic phosphate transporter, PiT family
SCNpilot_bf_inoc_scaffold_66_curated_98
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(118992..119624)
DNA (633bp) protein (211aa)
pit accessory protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6D766
Pit accessory protein {ECO:0000313|EMBL:KFN44912.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
phosphate transport regulator related to PhoU
SCNpilot_bf_inoc_scaffold_66_curated_99
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119842..121143
DNA (1302bp) protein (434aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36770.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Putative uncharacterized protein id=2489089 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
CBS domain-containing protein
SCNpilot_bf_inoc_scaffold_66_curated_100
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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121165..121770
DNA (606bp) protein (202aa)
Exopolysaccharide synthesis, ExoD n=2 Tax=mine drainage metagenome RepID=T0YCN2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJV31592.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
exoD; exopolysaccharide synthesis protein exoD
SCNpilot_bf_inoc_scaffold_66_curated_101
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121796..122587)
DNA (792bp) protein (264aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM2_9GAMM
RNA methyltransferase, TrmH family, group 1
SCNpilot_bf_inoc_scaffold_66_curated_102
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122754..123557
DNA (804bp) protein (268aa)
inositol monophosphatase n=1 Tax=Dyella japonica RepID=UPI0003082F5C
Inositol monophosphatase {ECO:0000313|EMBL:AIF47159.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
SCNpilot_bf_inoc_scaffold_66_curated_103
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123637..124584)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YXR7_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL81785.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
SCNpilot_bf_inoc_scaffold_66_curated_104
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124644..125891)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000373DA56
Sulfotransferase {ECO:0000313|EMBL:AIF49480.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
tetratricopeptide repeat protein,sulfotransferase family protein
SCNpilot_bf_inoc_scaffold_66_curated_105
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(126252..127229)
DNA (978bp) protein (326aa)
Protein-export membrane protein SecF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA9_9GAMM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
protein translocase subunit secF
SCNpilot_bf_inoc_scaffold_66_curated_106
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(127248..129113)
DNA (1866bp) protein (622aa)
preprotein translocase subunit SecD n=1 Tax=Dyella japonica RepID=UPI00030CCB9C
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
protein-export membrane protein, SecD/SecF family
SCNpilot_bf_inoc_scaffold_66_curated_107

Not on your lists

comp(129211..129546)
DNA (336bp) protein (112aa)
YajC n=1 Tax=mine drainage metagenome RepID=T1BAR1_9ZZZZ
YajC {ECO:0000313|EMBL:EQD65538.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
yajC; preprotein translocase subunit YajC
SCNpilot_bf_inoc_scaffold_66_curated_108
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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129698..131278
DNA (1581bp) protein (527aa)
Electron transport complex, RnfABCDGE type, C subunit id=2739695 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
electron transport complex protein RnfC; K03615 electron transport complex protein RnfC
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_66_curated_109
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131275..132291
DNA (1017bp) protein (339aa)
electron transporter RnfG n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B40141
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
RnfABCDGE type electron transport complex subunit D
SCNpilot_bf_inoc_scaffold_66_curated_110
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132284..132898
DNA (615bp) protein (205aa)
electron transporter RnfG n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B64A2E
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
rnfG_[H]; Electron transport complex protein RnfG
SCNpilot_bf_inoc_scaffold_66_curated_111
unknown

Not on your lists

132898..133425
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_66_curated_112
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133496..134143
DNA (648bp) protein (216aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W645_9GAMM
SCNpilot_bf_inoc_scaffold_66_curated_113
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134223..135398
DNA (1176bp) protein (392aa)
Polyphosphate-selective porin O n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VW06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR66345.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
oprP; putative porin P; K07221 phosphate-selective porin OprO and OprP
SCNpilot_bf_inoc_scaffold_66_curated_114
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135961..136431
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B62550
Uncharacterized protein {ECO:0000313|EMBL:AKC87526.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_66_curated_115
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136441..137313
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363FEB9
UPF0276 protein ThimaDRAFT_4545 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein; K09930 hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_66_curated_116
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137297..138061
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003646873
hypothetical protein; K09929 hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_66_curated_117
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138174..138839
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382EC9E
Uncharacterized protein {ECO:0000313|EMBL:KFL35473.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
DoxX family protein; K15977 putative oxidoreductase
SCNpilot_bf_inoc_scaffold_66_curated_118
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138860..139555
DNA (696bp) protein (232aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ribonuclease T; K03683 ribonuclease T [EC:3.1.13.-]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038249D0
SCNpilot_bf_inoc_scaffold_66_curated_119
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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139632..139913
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003789E59
Tax=RBG_16_Planctomycetes_64_12_curated
SCNpilot_bf_inoc_scaffold_66_curated_120
unknown

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comp(139983..140156)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying items 91-120 of 175 in total

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