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SCNpilot_bf_inoc_scaffold_66_curated

Search features with annotation key words

Displaying items 121-150 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_66_curated_121
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(140210..141577)
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ8_9GAMM
SCNpilot_bf_inoc_scaffold_66_curated_122
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141564..142901)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003461171
Uncharacterized protein {ECO:0000313|EMBL:KGI77279.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_66_curated_123
unknown

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comp(143099..143536)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_66_curated_124
unknown

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comp(143630..144082)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_66_curated_125
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144082..146682)
DNA (2601bp) protein (867aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AGG90263.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AGG90263.1};; EC=4.1.1.20 {ECO:0000313|EMBL:AGG90263.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
aspartate kinase (EC:4.1.1.20 2.7.2.4)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374D3C0
SCNpilot_bf_inoc_scaffold_66_curated_126
unknown

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146773..147024
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_66_curated_127
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(147131..148270)
DNA (1140bp) protein (380aa)
Ig domain protein, group 1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021V3_SOLUE
Bacterial Ig-like domain (Group 1) {ECO:0000313|EMBL:CEE12398.1}; Putative lipoprotein, rSAM/lipoprotein system {ECO:0000313|EMBL:CDZ76660.1}; Flags: Precursor;; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
Ig domain-containing protein; K13735 adhesin/invasin
SCNpilot_bf_inoc_scaffold_66_curated_128
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148528..150192)
DNA (1665bp) protein (555aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36610.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Amidohydrolase 3 id=2595778 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
amidohydrolase; K07047
SCNpilot_bf_inoc_scaffold_66_curated_129
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150355..151668
DNA (1314bp) protein (438aa)
Amino acid transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC63_9GAMM
Amino acid permease {ECO:0000313|EMBL:KGI77307.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
amino acid transporter
SCNpilot_bf_inoc_scaffold_66_curated_130
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151778..152368
DNA (591bp) protein (197aa)
putative oxidoreductase; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003638B04
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJV29668.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_66_curated_131
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152365..154611
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D0EB0
Aldehyde oxidase {ECO:0000313|EMBL:KGI77282.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
SCNpilot_bf_inoc_scaffold_66_curated_132
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154849..155928)
DNA (1080bp) protein (360aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W151_9GAMM
SCNpilot_bf_inoc_scaffold_66_curated_133
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155925..157112)
DNA (1188bp) protein (396aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:AGG87801.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AGG87801.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT24_9GAMM
SCNpilot_bf_inoc_scaffold_66_curated_134
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(157129..158181)
DNA (1053bp) protein (351aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
homoserine acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031712EB
SCNpilot_bf_inoc_scaffold_66_curated_135
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158662..159609
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036E3879
peptidase M23
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_66_curated_136
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159670..161523
DNA (1854bp) protein (618aa)
peptide chain release factor 3 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71CBD
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
peptide chain release factor 3; K02837 peptide chain release factor 3
SCNpilot_bf_inoc_scaffold_66_curated_137
unknown

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comp(161603..162139)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_66_curated_138
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(162132..162686)
DNA (555bp) protein (185aa)
hypothetical protein id=8266991 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_16_Aminicenantes_63_16_curated
SCNpilot_bf_inoc_scaffold_66_curated_139

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comp(162901..163329)
DNA (429bp) protein (143aa)
Signal transduction protein with CBS domain protein n=1 Tax=mine drainage metagenome RepID=T0YJT9_9ZZZZ
Signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EQD35696.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
SCNpilot_bf_inoc_scaffold_66_curated_140
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(163605..166268)
DNA (2664bp) protein (888aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_bf_inoc_scaffold_66_curated_141
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166560..167501)
DNA (942bp) protein (314aa)
bactoprenol glucosyl transferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000366D98F
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL95908.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_66_curated_142
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167611..168333)
DNA (723bp) protein (241aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
SCNpilot_bf_inoc_scaffold_66_curated_143
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168528..169418
DNA (891bp) protein (297aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG89_9GAMM
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
disulfide bond chaperone
SCNpilot_bf_inoc_scaffold_66_curated_144
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169537..172503)
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000314896F
Diguanylate cyclase {ECO:0000313|EMBL:GAN45634.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_bf_inoc_scaffold_66_curated_145
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172713..173768
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45633.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_66_curated_146
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174206..177088
DNA (2883bp) protein (961aa)
TonB-denpendent receptor n=1 Tax=Xanthomonas sacchari RepID=UPI00026319AF
TonB-dependent receptor {ECO:0000313|EMBL:GAN45632.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
TonB-dependent receptor
SCNpilot_bf_inoc_scaffold_66_curated_147
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177254..179065
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363E58D
Uncharacterized protein {ECO:0000313|EMBL:GAN45631.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_66_curated_148
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179130..180104
DNA (975bp) protein (325aa)
SecC motif-containing protein id=2595769 bin=GWF1_Xanthomonadales_69_6 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SecC motif-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_66_curated_149
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180165..181613)
DNA (1449bp) protein (483aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F6440
SCNpilot_bf_inoc_scaffold_66_curated_150
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181613..181909)
DNA (297bp) protein (99aa)
NAD(P) transhydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000373FD66
Uncharacterized protein {ECO:0000313|EMBL:EIJ44249.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
Displaying items 121-150 of 175 in total

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