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SCNpilot_bf_inoc_scaffold_69_curated

Search features with annotation key words

Displaying items 241-270 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_69_curated_241
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243581..244516
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5W9_RAMTT
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_bf_inoc_scaffold_69_curated_242
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244919..246295
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MatE family protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_69_curated_243
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

246417..246905
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003624739
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SCNpilot_bf_inoc_scaffold_69_curated_244
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247027..247725
DNA (699bp) protein (233aa)
lipase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255BB37
Lipase {ECO:0000313|EMBL:KGI77377.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
lipase, class 2
SCNpilot_bf_inoc_scaffold_69_curated_245
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247919..248323
DNA (405bp) protein (135aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TR82_STEMA
Extradiol dioxygenase {ECO:0000313|EMBL:KDR34366.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
hypothetical protein; K07032
SCNpilot_bf_inoc_scaffold_69_curated_246
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248387..249127)
DNA (741bp) protein (247aa)
transglutaminase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B34C87
Uncharacterized protein {ECO:0000313|EMBL:KFN42400.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
transglutaminase-like protein
SCNpilot_bf_inoc_scaffold_69_curated_247
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249269..250312)
DNA (1044bp) protein (348aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMT6_CAUST
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADG11809.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_bf_inoc_scaffold_69_curated_248
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250498..251580)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SC71_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74239.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_bf_inoc_scaffold_69_curated_249
unknown

Not on your lists

comp(251608..251805)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_69_curated_250
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251805..252437)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YEU1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE44501.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_bf_inoc_scaffold_69_curated_251
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252987..255044
DNA (2058bp) protein (686aa)
translation elongation factor G n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB16
Translation elongation factor G {ECO:0000313|EMBL:EYR65715.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative elongation factor G; K02355 elongation factor G
SCNpilot_bf_inoc_scaffold_69_curated_252
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255183..256745)
DNA (1563bp) protein (521aa)
TIR domain-containing protein n=1 Tax=Pseudomonas sp. GM80 RepID=J2YCM9_9PSED
Chaperone protein DnaK {ECO:0000313|EMBL:KFE64952.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
TIR protein
SCNpilot_bf_inoc_scaffold_69_curated_253
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256940..258169)
DNA (1230bp) protein (410aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT288.;"
histidine kinase; K00936 [EC:2.7.3.-]
Signal transduction histidine kinase n=1 Tax=Pseudomonas sp. GM30 RepID=J2XW19_9PSED
SCNpilot_bf_inoc_scaffold_69_curated_254
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258521..259522)
DNA (1002bp) protein (334aa)
CorA-like Mg2+ transporter protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYY7_9GAMM
CorA-like Mg2+ transporter protein {ECO:0000313|EMBL:EED37936.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Mg2+ transporter protein, CorA-like protein
SCNpilot_bf_inoc_scaffold_69_curated_255
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259857..260525
DNA (669bp) protein (223aa)
YihY family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWV1_9PROT
YihY family protein {ECO:0000313|EMBL:EHM02602.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein; K07058 membrane protein
SCNpilot_bf_inoc_scaffold_69_curated_256
unknown

Not on your lists

260522..261151
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_69_curated_257
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261195..262175)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C4998
AraC family transcriptional regulator {ECO:0000313|EMBL:KJJ95486.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
transcriptional regulator, AraC family
SCNpilot_bf_inoc_scaffold_69_curated_258
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262385..263023
DNA (639bp) protein (213aa)
MocR family transcriptional regulator (EC:2.6.1.-)
Putative threonine efflux protein n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XFG8_9RALS
Putative threonine efflux protein {ECO:0000313|EMBL:EON18043.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
SCNpilot_bf_inoc_scaffold_69_curated_259
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263041..263895
DNA (855bp) protein (285aa)
dienelactone hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000371447A
hypothetical protein
Dienelactone hydrolase {ECO:0000313|EMBL:KID08641.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
SCNpilot_bf_inoc_scaffold_69_curated_260
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

263892..264761
DNA (870bp) protein (290aa)
2-hydroxy-3-oxopropionate reductase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
NAD binding domain of 6-phosphogluconate dehydrogenase n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KTZ3_9ACTO
NAD binding domain of 6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:EKX64107.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
SCNpilot_bf_inoc_scaffold_69_curated_261
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264736..265281
DNA (546bp) protein (182aa)
cupin n=1 Tax=Methylovulum miyakonense RepID=UPI00037EF320
Cupin 2 barrel domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
SCNpilot_bf_inoc_scaffold_69_curated_262
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265348..266502
DNA (1155bp) protein (385aa)
Abhydrolase, alpha/beta hydrolase fold-containing protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUP1_9BURK
Abhydrolase, alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:EGF33687.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
alpha/beta hydrolase
SCNpilot_bf_inoc_scaffold_69_curated_263
unknown

Not on your lists

comp(267102..267728)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_69_curated_264
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267725..268255)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YEU1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE44501.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_69_curated_265
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268653..269414)
DNA (762bp) protein (254aa)
LytTR family two component transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9A9_9SPHN
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:KGM53651.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
LytTR family two component transcriptional regulator
SCNpilot_bf_inoc_scaffold_69_curated_266
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269411..270535)
DNA (1125bp) protein (375aa)
histidine kinase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B79E40
signal transduction histidine kinase LytS
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_bf_inoc_scaffold_69_curated_267
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270837..271316
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53652.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
id=2460917 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_bf_inoc_scaffold_69_curated_268
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271364..272392
DNA (1029bp) protein (343aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53654.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Uncharacterized protein id=2493350 bin=GWF1_Xanthomonadales_69_6 species=Glaciecola pallidula genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
PDZ/DHR/GLGF domain-containing protein
SCNpilot_bf_inoc_scaffold_69_curated_269
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272607..274313)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B4CEA1
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_69_curated_270
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274476..274826)
DNA (351bp) protein (117aa)
ATP-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYB1_SORCE
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AGP38212.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying items 241-270 of 272 in total

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