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SCNpilot_bf_inoc_scaffold_366_curated

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_366_curated_1
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..1884)
DNA (1884bp) protein (628aa)
Protease 1 n=1 Tax=Achromobacter lyticus RepID=API_ACHLY
hypothetical protein
Tax=RBG_16_Zixibacteria_43_9_curated
SCNpilot_bf_inoc_scaffold_366_curated_2
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2487..3209
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7B67
SCNpilot_bf_inoc_scaffold_366_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3443..3844)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98072.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_4

Not on your lists

comp(3861..5921)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CB032
Marine sediment metagenome DNA, contig: S01H4_C01984 {ECO:0000313|EMBL:GAG74278.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acyl-CoA synthase
SCNpilot_bf_inoc_scaffold_366_curated_5
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6299..7315
DNA (1017bp) protein (339aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-ACP synthase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B688B7
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_366_curated_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7414..8313
DNA (900bp) protein (300aa)
alpha/beta hydrolase fold domain-containing protein; K01563 haloalkane dehalogenase [EC:3.8.1.5]
alpha/beta hydrolase n=1 Tax=Pseudomonas geniculata RepID=UPI000299FAD6
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_bf_inoc_scaffold_366_curated_7
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8335..9066
DNA (732bp) protein (244aa)
Expressed protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7A2_HERA2
hypothetical protein
Expressed protein {ECO:0000313|EMBL:ABX06385.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_bf_inoc_scaffold_366_curated_8
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9176..10840
DNA (1665bp) protein (555aa)
Peptide synthase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H1H4_XANCT
Peptide synthase {ECO:0000313|EMBL:ELQ11841.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
peptide synthase
SCNpilot_bf_inoc_scaffold_366_curated_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11102..11971
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036555EE
Oxidoreductase {ECO:0000313|EMBL:GAN45180.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Gfo/Idh/MocA family oxidoreductase
SCNpilot_bf_inoc_scaffold_366_curated_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..13389
DNA (1323bp) protein (441aa)
Glucose/sorbosone dehydrogenase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024X4_SOLUE
glucose/sorbosone dehydrogenase-like protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCNpilot_bf_inoc_scaffold_366_curated_11
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13467..14075)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B64DD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EGV33047.1}; Flags: Precursor;; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
ahpC/TSA family protein
SCNpilot_bf_inoc_scaffold_366_curated_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14072..16237)
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037D63DF
dsbD; thiol:disulfide interchange protein DsbD
Thiol:disulfide interchange protein DsbD, putative {ECO:0000313|EMBL:ACI98072.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_bf_inoc_scaffold_366_curated_13
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..18176
DNA (1713bp) protein (571aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJF4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKE52869.1}; Flags: Precursor;; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_14
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18187..19611
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI0003818ED1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR14631.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
SCNpilot_bf_inoc_scaffold_366_curated_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19739..21001
DNA (1263bp) protein (421aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX68_9GAMM
MFS transporter {ECO:0000313|EMBL:GAN45570.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
arabinose efflux permease family protein
SCNpilot_bf_inoc_scaffold_366_curated_16
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20998..21342
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW3_9GAMM
EF hand domain-containing protein {ECO:0000313|EMBL:AKC88300.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21591..21809
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003821493
Uncharacterized protein {ECO:0000313|EMBL:AIF45868.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21883..22278
DNA (396bp) protein (132aa)
UPF0225 protein UU9_09672 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ04_9GAMM
UPF0225 protein UU9_09672 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_19
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22399..23910
DNA (1512bp) protein (504aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
glpD; Aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3C0A7_9BURK
SCNpilot_bf_inoc_scaffold_366_curated_20

Not on your lists

24091..24822
DNA (732bp) protein (244aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EQD62064.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD62064.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1C9D6_9ZZZZ
methylase
SCNpilot_bf_inoc_scaffold_366_curated_21
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..25864
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037716CF
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_366_curated_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25861..26433
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B3FC6
Uncharacterized protein {ECO:0000313|EMBL:GAN45064.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Hypothetical Protein
SCNpilot_bf_inoc_scaffold_366_curated_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26658..27290
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003780401
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO36852.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
TetR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_366_curated_24
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27856..28401)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T021_XANCT
Activator of XA21-mediated immunity Ax21 {ECO:0000313|EMBL:KGQ17835.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SCNpilot_bf_inoc_scaffold_366_curated_25
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28654..29193)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B0714
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_366_curated_26
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29230..29724
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YA19_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO78923.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_27
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29726..30424)
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=mine drainage metagenome RepID=T1AKP7_9ZZZZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM53188.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_bf_inoc_scaffold_366_curated_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30598..33342
DNA (2745bp) protein (915aa)
Zinc protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W778_9GAMM
Peptidase M16 {ECO:0000313|EMBL:GAN45084.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
zinc protease
SCNpilot_bf_inoc_scaffold_366_curated_29
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33619..34521)
DNA (903bp) protein (301aa)
Multidrug DMT transporter permease n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S030_9RALS
Multidrug DMT transporter permease {ECO:0000313|EMBL:EPX97502.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_366_curated_30
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34696..35253)
DNA (558bp) protein (186aa)
N-acetyltransferase GCN5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B69E5E
Uncharacterized protein {ECO:0000313|EMBL:KFN43583.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
putative N-acetyltransferase
Displaying items 1-30 of 56 in total

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