ggKbase home page

SCNpilot_bf_inoc_scaffold_304_curated

Search features with annotation key words

Displaying items 31-60 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_304_curated_31
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36631..37092
DNA (462bp) protein (154aa)
MarR family transcriptional regulator n=1 Tax=Serratia marcescens RepID=UPI0002E62219
MarR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EZQ58752.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
SCNpilot_bf_inoc_scaffold_304_curated_32
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37239..37664
DNA (426bp) protein (142aa)
Organic hydroperoxide resistance protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JII0_9BURK
Organic hydroperoxide resistance protein {ECO:0000313|EMBL:ESJ26820.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ohr; organic hydroperoxide resistance protein
SCNpilot_bf_inoc_scaffold_304_curated_33
unknown

Not on your lists

comp(37711..39213)
DNA (1503bp) protein (501aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_34
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39347..40018)
DNA (672bp) protein (224aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter denitrificans RepID=I4WS52_9GAMM
putative acyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_304_curated_35
unknown

Not on your lists

comp(40015..40194)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_36
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40241..42400)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000369E17B
Uncharacterized protein {ECO:0000313|EMBL:AJC47593.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_304_curated_37
unknown

Not on your lists

comp(42651..42953)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_38
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43248..43709)
DNA (462bp) protein (154aa)
UPI0003CEB7FD related cluster n=1 Tax=unknown RepID=UPI0003CEB7FD
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
SCNpilot_bf_inoc_scaffold_304_curated_39
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43922..45340)
DNA (1419bp) protein (473aa)
phenylhydantoinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2]
Dihydropyrimidinase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2SY03_BURPP
Phenylhydantoinase {ECO:0000313|EMBL:KHD20471.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
SCNpilot_bf_inoc_scaffold_304_curated_40
unknown

Not on your lists

45419..46027
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_41
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45928..47418)
DNA (1491bp) protein (497aa)
Permease, cytosine/purine, uracil, thiamine, allantoin family n=2 Tax=Burkholderia multivorans RepID=B9BWL6_9BURK
NCS1 nucleoside transporter; K03457 nucleobase:cation symporter-1, NCS1 family
NCS1 nucleoside transporter family {ECO:0000313|EMBL:ABO58456.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SCNpilot_bf_inoc_scaffold_304_curated_42
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47601..48872)
DNA (1272bp) protein (424aa)
dihydropyrimidine dehydrogenase subunit B n=1 Tax=Burkholderia bryophila RepID=UPI00037E0EB7
dihydropyrimidine dehydrogenase
Dihydropyrimidine dehydrogenase (NADP+) {ECO:0000313|EMBL:AFT86537.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCNpilot_bf_inoc_scaffold_304_curated_43
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48874..50241)
DNA (1368bp) protein (456aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFN7_9PROT
Dihydropyrimidine dehydrogenase subunit A {ECO:0000313|EMBL:EWY38928.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_bf_inoc_scaffold_304_curated_44
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50504..50857)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B537AD
Uncharacterized protein {ECO:0000313|EMBL:KFN41772.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_304_curated_45
unknown

Not on your lists

comp(50985..51488)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_46
unknown

Not on your lists

comp(51693..52352)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_47
unknown

Not on your lists

comp(52395..52718)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_48
unknown

Not on your lists

comp(52752..52982)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGR6_9GAMM
SCNpilot_bf_inoc_scaffold_304_curated_49
unknown

Not on your lists

comp(53203..53697)
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_50
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53738..55006)
DNA (1269bp) protein (423aa)
N-carbamoyl-L-amino-acid hydrolase (amaB) (EC:3.5.1.87)
Allantoate amidohydrolase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T8A2_9RALS
Allantoate amidohydrolase {ECO:0000313|EMBL:KHK58585.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
SCNpilot_bf_inoc_scaffold_304_curated_51
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55092..56594)
DNA (1503bp) protein (501aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDB9_METPB
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACB82327.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_bf_inoc_scaffold_304_curated_52
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56666..58018)
DNA (1353bp) protein (451aa)
beta alanine--pyruvate transaminase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036A46E0
Omega-amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:KFE71478.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SCNpilot_bf_inoc_scaffold_304_curated_53
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58336..59622
DNA (1287bp) protein (429aa)
Cytosine deaminase {ECO:0000313|EMBL:KGM35778.1}; EC=3.5.4.1 {ECO:0000313|EMBL:KGM35778.1};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
codA; cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1]
Cytosine deaminase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XAG0_9RALS
SCNpilot_bf_inoc_scaffold_304_curated_54
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59645..60583)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_304_curated_55
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60811..62460)
DNA (1650bp) protein (550aa)
molecular chaperone GroEL n=1 Tax=Xanthomonas RepID=UPI000262B38B
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
chaperonin GroEL; K04077 chaperonin GroEL
SCNpilot_bf_inoc_scaffold_304_curated_56
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62575..62865)
DNA (291bp) protein (97aa)
molecular chaperone GroES n=1 Tax=Rudaea cellulosilytica RepID=UPI0003801281
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Heat shock protein 60 family co-chaperone GroES; K04078 chaperonin GroES
SCNpilot_bf_inoc_scaffold_304_curated_57
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63165..63488
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369331A
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:AHX15672.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
uncharacterized protein involved in tolerance to divalent cations
SCNpilot_bf_inoc_scaffold_304_curated_58
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63563..65917
DNA (2355bp) protein (785aa)
cytochrome c biogenesis protein transmembrane region; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
Thiol:disulfide interchange protein DsbD n=1 Tax=Thiocapsa marina 5811 RepID=F9UGH0_9GAMM
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_304_curated_59
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65917..66543
DNA (627bp) protein (209aa)
redoxin n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B717B6
Uncharacterized protein {ECO:0000313|EMBL:KGM56470.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Cytochrome c-type biogenesis protein ResA
SCNpilot_bf_inoc_scaffold_304_curated_60
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66871..67308
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
3-dehydroquinate dehydratase, type II (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003045C59
Displaying items 31-60 of 93 in total

View Taxonomy