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SCNpilot_bf_inoc_scaffold_304_curated

Search features with annotation key words

Displaying items 61-90 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_304_curated_61
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67345..67845
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003646ECF
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_304_curated_62
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68316..69683
DNA (1368bp) protein (456aa)
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rudaea cellulosilytica RepID=UPI0003732FE3
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAN44934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
acetyl-CoA carboxylase, biotin carboxylase subunit
SCNpilot_bf_inoc_scaffold_304_curated_63
unknown

Not on your lists

69670..70092
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_64
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70106..70990
DNA (885bp) protein (295aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
ribosomal protein L11 methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D905CB
SCNpilot_bf_inoc_scaffold_304_curated_65
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71105..71896
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9165C
Uncharacterized protein {ECO:0000313|EMBL:AIF45820.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Protein of unknown function (DUF3426)
SCNpilot_bf_inoc_scaffold_304_curated_66
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72022..72333
DNA (312bp) protein (104aa)
Fis family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000346B768
Fis family transcriptional regulator {ECO:0000313|EMBL:GAN45852.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
transcriptional activator Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
SCNpilot_bf_inoc_scaffold_304_curated_67
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72435..74012
DNA (1578bp) protein (526aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=mine drainage metagenome RepID=T1CGY7_9ZZZZ
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_304_curated_68
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74087..74494)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FB4C
Protein of unknown function (DUF2782)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_304_curated_69
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74845..77589
DNA (2745bp) protein (915aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Dyella ginsengisoli RepID=UPI00037C8D09
DNA polymerase I {ECO:0000313|EMBL:GAN44936.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_304_curated_70
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(78003..78764)
DNA (762bp) protein (254aa)
Short chain dehydrogenase id=3038409 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
short chain dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_304_curated_71
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78914..79720
DNA (807bp) protein (269aa)
short-chain dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3ECBE
Uncharacterized protein {ECO:0000313|EMBL:KFN45849.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
short chain dehydrogenase
SCNpilot_bf_inoc_scaffold_304_curated_72
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79717..80763
DNA (1047bp) protein (349aa)
saccharopine dehydrogenase (EC:1.5.1.7)
Uncharacterized protein {ECO:0000313|EMBL:KFN48765.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Uncharacterized protein id=3038401 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_bf_inoc_scaffold_304_curated_73

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80912..81475
DNA (564bp) protein (188aa)
Protein belonging to Uncharacterized protein family UPF0114 n=2 Tax=mine drainage metagenome RepID=T1AID0_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0114 {ECO:0000313|EMBL:EQD60261.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_304_curated_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81500..82903)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380F47A
Uncharacterized protein {ECO:0000313|EMBL:GAN44939.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_304_curated_75
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82919..85174
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A7F70
DNA/RNA helicase, superfamily I
SCNpilot_bf_inoc_scaffold_304_curated_76
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(85214..86404)
DNA (1191bp) protein (397aa)
putative glycosyltransferase (group 1) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C497D
Uncharacterized protein {ECO:0000313|EMBL:KIJ75148.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_304_curated_77
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86401..87483)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5368C
Uncharacterized protein {ECO:0000313|EMBL:KFN44607.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_304_curated_78
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87527..88135)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4B736
Uncharacterized protein {ECO:0000313|EMBL:KFN44608.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
methyltransferase, FkbM family domain protein
SCNpilot_bf_inoc_scaffold_304_curated_79
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(88135..89310)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8Q2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00505.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_bf_inoc_scaffold_304_curated_80

Not on your lists

89404..89946
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72435.1}; TaxID=1256558 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
SCNpilot_bf_inoc_scaffold_304_curated_81
unknown

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89950..91305
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_82
unknown

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91322..91687
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_83
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

91684..94356
DNA (2673bp) protein (891aa)
Predicted glycosyltransferase n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LR88_PAEPP
Predicted glycosyltransferase {ECO:0000313|EMBL:GAC43756.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 14706.;"
family 2 glycosyl transferase; K07011
SCNpilot_bf_inoc_scaffold_304_curated_84
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94353..95837
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362BC9A
Uncharacterized protein {ECO:0000313|EMBL:KJB95862.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
family 2 glycosyl transferase
SCNpilot_bf_inoc_scaffold_304_curated_85
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95834..96868
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JT54_BURP8
GDP-mannose 4,6-dehydratase
SCNpilot_bf_inoc_scaffold_304_curated_86
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96865..99099
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376B74C
Putative Glycosyl transferase WbpY {ECO:0000313|EMBL:CDH45569.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
mannosyltransferase
SCNpilot_bf_inoc_scaffold_304_curated_87
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(99116..101845)
DNA (2730bp) protein (910aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B2476
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_bf_inoc_scaffold_304_curated_88
unknown

Not on your lists

comp(101985..102644)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_304_curated_89
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102728..103504)
DNA (777bp) protein (259aa)
Protein containing DUF980 n=3 Tax=mine drainage metagenome RepID=T1CLK7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN45712.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein; K09933 hypothetical protein
SCNpilot_bf_inoc_scaffold_304_curated_90
unknown

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comp(103560..103949)
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 61-90 of 93 in total

View Taxonomy