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SCNpilot_bf_inoc_scaffold_81_curated

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Displaying items 1-30 of 120 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_81_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..8643)
DNA (8643bp) protein (2881aa)
YD repeat protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C332_DELAS
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABX37143.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_81_curated_2
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(8640..26174)
DNA (17535bp) protein (5845aa)
Fibronectin, type III domain protein id=3118741 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
APHP domain-containing protein
Tax=GWC2_Nitrospirae_56_14_curated
SCNpilot_bf_inoc_scaffold_81_curated_3
unknown

Not on your lists

comp(26203..26568)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_81_curated_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

27057..27593
DNA (537bp) protein (179aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B59346
Membrane protein {ECO:0000313|EMBL:KIJ70788.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_5
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27790..28161)
DNA (372bp) protein (124aa)
Histone family protein DNA-binding protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G0P3_9BURK
DNA-binding protein {ECO:0000313|EMBL:KHD19728.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
bph2; histone-like DNA-binding protein
SCNpilot_bf_inoc_scaffold_81_curated_6
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28510..29853)
DNA (1344bp) protein (448aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN41631.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
Amidohydrolase family protein id=2826718 bin=GWF1_Xanthomonadales_69_6 species=Sphingomonas sp. MM-1 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
amidohydrolase
SCNpilot_bf_inoc_scaffold_81_curated_7
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29996..31009
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036D996C
Uncharacterized protein {ECO:0000313|EMBL:KEZ76398.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31226..32671)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NAQ4_9GAMM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJV36743.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32942..33394)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI77637.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_81_curated_10
unknown

Not on your lists

comp(33444..33746)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_81_curated_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34061..36061)
DNA (2001bp) protein (667aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
deaD; Cold-shock DEAD box protein A (ATP-dependent RNA helicase deaD) (EC:3.6.1.-)
ATP-dependent RNA helicase (Cold-shock dead box protein) (Fragment) n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H2T4_XANCT
SCNpilot_bf_inoc_scaffold_81_curated_12
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36397..37320
DNA (924bp) protein (308aa)
Lipase class 3 n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DHV9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHF00092.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
lipase class 3
SCNpilot_bf_inoc_scaffold_81_curated_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37396..38670
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W953_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95994.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_14
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38644..39291)
DNA (648bp) protein (216aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Phage SPO1 DNA polymerase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIJ7_9GAMM
DNA polymerase {ECO:0000313|EMBL:KJV26875.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_81_curated_15
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39405..39857)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R841_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:EYR67877.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_16
unknown

Not on your lists

39992..40558
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_81_curated_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40641..41102)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQJ4_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB55333.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_18
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41325..41891
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50540.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Putative uncharacterized protein id=2501221 bin=GWF1_Xanthomonadales_69_6 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41945..42433
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F9E7F
FKBP-type peptidyl-prolyl cis-trans isomerase
SCNpilot_bf_inoc_scaffold_81_curated_20
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42703..43206)
DNA (504bp) protein (168aa)
Putative nlpc/p60 family protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9I5_XANAP
nlpc/p60 family protein
Putative nlpc/p60 family protein {ECO:0000313|EMBL:CBA16926.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
SCNpilot_bf_inoc_scaffold_81_curated_21
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43203..43775)
DNA (573bp) protein (191aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000315A812
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AKC85826.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_bf_inoc_scaffold_81_curated_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43867..44418
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E287C
Alpha/beta hydrolase {ECO:0000313|EMBL:AHX14052.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
alpha/beta hydrolase superfamily enzyme, predicted hydrolase
SCNpilot_bf_inoc_scaffold_81_curated_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44423..46552
DNA (2130bp) protein (710aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380E9A9
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative N6-adenine-specific DNA methylase
SCNpilot_bf_inoc_scaffold_81_curated_24
unknown

Not on your lists

46830..47270
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_81_curated_25
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47463..48122
DNA (660bp) protein (220aa)
SAM-dependent methlyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4CF86
Uncharacterized protein {ECO:0000313|EMBL:KFN41218.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
type 12 methyltransferase
SCNpilot_bf_inoc_scaffold_81_curated_26
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48237..49640
DNA (1404bp) protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
glutaminyl-tRNA synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036484F0
SCNpilot_bf_inoc_scaffold_81_curated_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49673..50029
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003773780
Uncharacterized protein {ECO:0000313|EMBL:AHX13804.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_bf_inoc_scaffold_81_curated_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50136..50594
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EFA0C
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AHX14234.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K09940 hypothetical protein
SCNpilot_bf_inoc_scaffold_81_curated_29
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50661..51569)
DNA (909bp) protein (303aa)
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369EF91
Geranyl transferase {ECO:0000313|EMBL:KJV30868.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_81_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51569..51823)
DNA (255bp) protein (85aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A3_9GAMM
Displaying items 1-30 of 120 in total

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