ggKbase home page

SCNpilot_bf_inoc_scaffold_351_curated_21

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(21609..22178)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Salisaeta longa RepID=UPI0003B6720F similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 183.0
  • Bit_score: 156
  • Evalue 2.00e-35
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88571.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 191.0
  • Bit_score: 145
  • Evalue 6.50e-32
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 142
  • Evalue 1.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGAACGACAACGAGATCACCGCGCACATCGCCGCGGCCAATCGCAACCCGGACGAGCGCGACAAGGCGCTGAACCTGGTCTACGACGATCTGCTGCGTATCGCGCGGGCCGAGCTCGCGCGGCACCGGCGCGGCGACACGCTGAACACGCGTGCCCTGGTCAACGAGGCCTATCTCAAGCTGTTCGACCGCGACGGCGGCCGCTACGAGAATCGCAAGCACTTCTTCGCGACCGCGGCGCGCGCGATGCGCCAGGTCGTCATCGACTACGCCCGTGCGCGCCTGGCCGAACGCCGCGGCGCCGGCGCCGAGCACGTCGAACTCGATGCGCTGGAAGGGCTGCCGCTGCCGGTGGACGAACAGGCCGAGCAGCTGGTCGGCATGGACCGCGCGCTGGAAAAGCTCGCCGCACTGGACGAGCGCCTGGTCACCGTCATCGAGATGCGCTTCTTCGCCGGGCTCGAAGTGAAGGACATCGCCGAGCTGCTCGGCGTATCGGAACCGACGATCAAGCGCGACACCCGCGCGGCCAAGGCGTTTCTGCAGAAAGAGCTGGCGCTGGGACACTGA
PROTEIN sequence
Length: 190
MNDNEITAHIAAANRNPDERDKALNLVYDDLLRIARAELARHRRGDTLNTRALVNEAYLKLFDRDGGRYENRKHFFATAARAMRQVVIDYARARLAERRGAGAEHVELDALEGLPLPVDEQAEQLVGMDRALEKLAALDERLVTVIEMRFFAGLEVKDIAELLGVSEPTIKRDTRAAKAFLQKELALGH*