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SCNpilot_bf_inoc_scaffold_351_curated

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_351_curated_1
unknown

Not on your lists

3..143
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207..1976)
DNA (1770bp) protein (590aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C8V9_9XANT
Uncharacterized protein {ECO:0000313|EMBL:GAN45174.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_3
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2090..2869
DNA (780bp) protein (260aa)
Membrane protein {ECO:0000313|EMBL:KGM52711.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
Rhomboid family protein id=2461055 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2844..4145
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XQJ7_ALCXX
Protein of uncharacterised function (DUF3142) {ECO:0000313|EMBL:CKG84480.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4161..4628)
DNA (468bp) protein (156aa)
AsnC family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DF556E
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAN45170.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_bf_inoc_scaffold_351_curated_6
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4767..5657
DNA (891bp) protein (297aa)
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1); K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1]
phenylalanine 4-monooxygenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D592
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:KFN42741.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
SCNpilot_bf_inoc_scaffold_351_curated_7
unknown

Not on your lists

comp(5875..6354)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6478..7083)
DNA (606bp) protein (202aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W785_9GAMM
Acyltransferase {ECO:0000313|EMBL:GAN45078.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_bf_inoc_scaffold_351_curated_9
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7080..7502)
DNA (423bp) protein (141aa)
Peptidyl-tRNA hydrolase id=2693649 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFN52052.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein; K15034 ribosome-associated protein
SCNpilot_bf_inoc_scaffold_351_curated_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7512..7994)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361101C
Hypothetical Protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_351_curated_11
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8170..11553
DNA (3384bp) protein (1128aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9D0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16379.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_bf_inoc_scaffold_351_curated_12
unknown

Not on your lists

11798..12229
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_13
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12284..13717
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI00034A8804
serine protease
Serine protease {ECO:0000313|EMBL:AFY01112.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
SCNpilot_bf_inoc_scaffold_351_curated_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13691..14437)
DNA (747bp) protein (249aa)
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E851C
Pseudouridylate synthase {ECO:0000313|EMBL:AHX15085.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_bf_inoc_scaffold_351_curated_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14442..16643)
DNA (2202bp) protein (734aa)
peptidase S46 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B7446D
Uncharacterized protein {ECO:0000313|EMBL:KFN41429.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
uncharacterized protein involved in exopolysaccharide biosynthesis
SCNpilot_bf_inoc_scaffold_351_curated_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16957..17853
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KBM7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE48493.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_bf_inoc_scaffold_351_curated_17
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17913..18620
DNA (708bp) protein (236aa)
Phage shock protein A, PspA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSY3_ACCPU
PspA/IM30 family protein {ECO:0000313|EMBL:EXI84851.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
phage shock protein PspA; K03969 phage shock protein A
SCNpilot_bf_inoc_scaffold_351_curated_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18630..20456
DNA (1827bp) protein (609aa)
AAA ATPase central domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSY2_ACCPU
AAA ATPase central domain-containing protein
AAA ATPase central domain protein {ECO:0000313|EMBL:ACV34725.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCNpilot_bf_inoc_scaffold_351_curated_19
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20579..21031
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVK9_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY17570.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_bf_inoc_scaffold_351_curated_20
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21131..21556
DNA (426bp) protein (142aa)
Osmotically inducible protein C n=8 Tax=Bordetella RepID=K0MHP5_BORPB
Peroxiredoxin OsmC {ECO:0000313|EMBL:KJJ98579.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
osmC; osmotically inducible protein C
SCNpilot_bf_inoc_scaffold_351_curated_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21609..22178)
DNA (570bp) protein (190aa)
RNA polymerase sigma 70 n=1 Tax=Salisaeta longa RepID=UPI0003B6720F
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88571.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase, sigma subunit, ECF family
SCNpilot_bf_inoc_scaffold_351_curated_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22367..22792
DNA (426bp) protein (142aa)
hypothetical protein TGME49_103250 n=1 Tax=Toxoplasma gondii ME49 RepID=UPI000185F6EA
Uncharacterized protein {ECO:0000313|EMBL:EYF03667.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22795..23595
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036EFB42
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_bf_inoc_scaffold_351_curated_24
unknown

Not on your lists

23856..24188
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_25
unknown

Not on your lists

24188..24298
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24375..25019)
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44200.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Putative uncharacterized protein id=4326272 bin=GWF2_OP3_43_52 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_27
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25103..25795)
DNA (693bp) protein (231aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTH1_PSEMN
Nuclease {ECO:0000313|EMBL:KGM54077.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
SCNpilot_bf_inoc_scaffold_351_curated_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25932..27593)
DNA (1662bp) protein (554aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003633B32
SCNpilot_bf_inoc_scaffold_351_curated_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27590..28228)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380A40E
Sterol-binding protein {ECO:0000313|EMBL:GAN45081.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_30
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28268..29221)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U800_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKF84950.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
Displaying items 1-30 of 65 in total

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