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SCNpilot_bf_inoc_scaffold_351_curated

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_351_curated_31
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29613..30248
DNA (636bp) protein (212aa)
Putative threonine efflux protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TJY0_9BURK
Putative threonine efflux protein {ECO:0000313|EMBL:EJL78867.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
lysine exporter protein LysE/YggA
SCNpilot_bf_inoc_scaffold_351_curated_32
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30283..31293)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F1D77
3-beta hydroxysteroid dehydrogenase/isomerase
Tax=GWC2_Geobacteraceae_58_44_curated
SCNpilot_bf_inoc_scaffold_351_curated_33
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31393..33282)
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX2_9GAMM
SCNpilot_bf_inoc_scaffold_351_curated_34
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33515..34366
DNA (852bp) protein (284aa)
spermidine synthase (EC:2.5.1.16)
spermidine synthase n=1 Tax=Dyella japonica RepID=UPI0002E73228
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_bf_inoc_scaffold_351_curated_35
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34757..35668
DNA (912bp) protein (304aa)
malate permease n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003764F33
Uncharacterized protein {ECO:0000313|EMBL:KFN50688.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein; K07088
SCNpilot_bf_inoc_scaffold_351_curated_36
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35805..36614)
DNA (810bp) protein (270aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_351_curated_37

Not on your lists

comp(37212..37982)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C6C5C
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_C01984 {ECO:0000313|EMBL:GAG74278.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_351_curated_38
unknown

Not on your lists

comp(38073..38801)
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_39
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39014..39634
DNA (621bp) protein (207aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Xanthomonas RepID=V7ZCY5_9XANT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ETC88481.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_351_curated_40
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39639..40283
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002F52CBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX46531.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_351_curated_41
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40291..41595
DNA (1305bp) protein (435aa)
subtilase family serine protease (EC:3.4.21.-)
Subtilase family serine protease, probable n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z148_XANCT
Subtilase family serine protease, probable {ECO:0000313|EMBL:EKU24680.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
SCNpilot_bf_inoc_scaffold_351_curated_42
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41598..42662
DNA (1065bp) protein (355aa)
Cytochrome C family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWJ4_PSEUP
cytochrome C family protein
Cytochrome C family protein {ECO:0000313|EMBL:AER56501.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_351_curated_43
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42678..45224
DNA (2547bp) protein (849aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWJ5_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56502.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_351_curated_44
unknown

Not on your lists

45302..45703
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_45
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45753..46436
DNA (684bp) protein (228aa)
Cytochrome c4 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWJ6_PSEUP
cytochrome c4
Cytochrome c4 {ECO:0000313|EMBL:AER56503.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_351_curated_46
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46433..46768
DNA (336bp) protein (112aa)
high potential iron-sulfur protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003799FD9
High potential iron-sulfur protein {ECO:0000313|EMBL:AHX13716.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
high potential iron-sulfur protein
SCNpilot_bf_inoc_scaffold_351_curated_47
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47369..56404
DNA (9036bp) protein (3012aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003737B44
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABI42179.1}; Flags: Precursor;; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
SCNpilot_bf_inoc_scaffold_351_curated_48
unknown

Not on your lists

56397..57086
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_49
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57120..57413)
DNA (294bp) protein (98aa)
Putative membrane protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3KB88_PSEFS
Uncharacterized protein {ECO:0000313|EMBL:KEO91161.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_50
unknown

Not on your lists

57484..58200
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_351_curated_51
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58722..59552)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI000368144E
Uncharacterized protein {ECO:0000313|EMBL:KEO91161.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
multidrug ABC transporter ATPase/permease
SCNpilot_bf_inoc_scaffold_351_curated_52
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59651..60094)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377DE5B
Membrane protein {ECO:0000313|EMBL:GAN45560.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_53
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60209..60625)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E7FD7
Uncharacterized protein {ECO:0000313|EMBL:EIL89271.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_351_curated_54
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60706..61182)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346C8BB
Thioesterase {ECO:0000313|EMBL:KJV37385.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
thioesterase-like protein
SCNpilot_bf_inoc_scaffold_351_curated_55

Not on your lists

61253..62065
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003714C96
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:EQD36744.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
uroporphyrinogen-III synthase
SCNpilot_bf_inoc_scaffold_351_curated_56
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62159..63277
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003799A3E
Uncharacterized protein {ECO:0000313|EMBL:KJV37407.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative enzyme of heme biosynthesis
SCNpilot_bf_inoc_scaffold_351_curated_57
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63274..64539
DNA (1266bp) protein (422aa)
heme biosynthesis protein HemY n=1 Tax=Dyella japonica RepID=UPI00030C60B5
Heme biosynthesis protein HemY {ECO:0000313|EMBL:AIF45840.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative enzyme of heme biosynthesis
SCNpilot_bf_inoc_scaffold_351_curated_58
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64775..65341)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382A60C
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_351_curated_59
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65338..66393)
DNA (1056bp) protein (352aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHI1_9GAMM
Oxidoreductase {ECO:0000313|EMBL:GAN45563.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
2-polyprenylphenol hydroxylase-like oxidoreductase
SCNpilot_bf_inoc_scaffold_351_curated_60
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66506..66940
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT8_9GAMM
Esterase {ECO:0000313|EMBL:GAN45564.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
Displaying items 31-60 of 65 in total

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