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SCNpilot_bf_inoc_scaffold_351_curated_39

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 39014..39634

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=2 Tax=Xanthomonas RepID=V7ZCY5_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 200.0
  • Bit_score: 195
  • Evalue 5.60e-47
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ETC88481.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 200.0
  • Bit_score: 195
  • Evalue 7.80e-47
RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 193
  • Evalue 5.10e-47

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Taxonomy

Xanthomonas hortorum → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCAAGCTGACAGCGACAACCCGGATACGCAGGATGCCGGCGCGGCGGACGCGGGCGAGGCGACAGAGCGCCGCCTGCTCGCGGCCGTCGCGCGCGGCGACCGCGTCGCGTTCGAGCGTCTCTATCTGCGCCAGCACGGCGTGCTCGCGCGCTTCCTCGCGCGGCACACGGCGCGGCGCGATCTCGTCGACGACATCATCAACGACGCATTCTGGGTGGTCTGGCGCAAGGCGGCCGAGTTCCGCGGCGATTCCAAGGTCGGTACCTGGATCATCGGCATCGCCTACCGCTGCATGCTCAAGACCCTGCGCCAGAATCTGCCGGCGGCCGAGGTCGAGGTCGATCTGCCGGACCCGGCCGCCACGGAAACCGGCGAAGCCGAGCAGCGCGAGCTGCGCGATTGGGTGCGCCGCGGCCTGGATCTGCTGTCGCCGGAGCAGCGCATGACCCTGGAGCTGGCCTATTACCTCGGCCAGTCCTGCGAGGAGATCGCGGTGATCATGAATTGCGCCACCGGCACAGTGAAGGCGCGCATGTTCCACGCGCGTCTGCGCCTGCGCAATTCGCTGCCGGCGCTGGGCGGCGCCGATTTCGCCGCGAACCCCGCCGAACGGAAATGA
PROTEIN sequence
Length: 207
MQADSDNPDTQDAGAADAGEATERRLLAAVARGDRVAFERLYLRQHGVLARFLARHTARRDLVDDIINDAFWVVWRKAAEFRGDSKVGTWIIGIAYRCMLKTLRQNLPAAEVEVDLPDPAATETGEAEQRELRDWVRRGLDLLSPEQRMTLELAYYLGQSCEEIAVIMNCATGTVKARMFHARLRLRNSLPALGGADFAANPAERK*