ggKbase home page

SCNpilot_bf_inoc_scaffold_32_curated_62

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(84558..85820)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 417.0
  • Bit_score: 583
  • Evalue 1.90e-163
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 417.0
  • Bit_score: 583
  • Evalue 6.10e-164
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 417.0
  • Bit_score: 583
  • Evalue 2.70e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGAGCGCGGCTTCGCAGACAGCCGTCGCGACGGTCTGGCGCATGGAGTCCACGCGCCTGATCGGCGGCCTCATGCGCCTCGTGCGCGACCTGAGTCTGGCCGAGGACCTGGCCCAGGACGCGCTGGTGGCGGCGCTGGAGCAATGGCCTGCGAGCGGCGTGCCGGACAATCCCGGCGCCTGGCTCATGGCCGCGGCCAAGCATCGCGCGATCGACCGCCTGCGGCGCAATGACATGGCGCAGCGCAAACACGACGAACTCGGCGCCGAGCACGAACTGCAGCAGCTGCTGCAGGCCCCCGACGGCGACGCGCTCGACGACGGCGTCGGCGACGACGTGCTGCGGCTGATCTTCATCGCCTGTCATCCGGTGCTGTCGGGCGAAGCGCGCGCGGCGCTGACCCTGCGTCTGATCGCCGGTCTGACGACCGATGAGATCGCGCGGGCGTTCCTGCAGAGCGAGCCGACGATCGCCCAGCGCATCGTGCGCGCCAAGCGCAGCCTGAGCGCGGCCAACGTGCCGTTCGAGCTGCCGCCGGCCGGCGAGCTGGCCCAGCGGCTGTCCTCGGTGCTCGGCGTGATCTACCTGATCTTCAACGAAGGCTATGCGGCCACGGCCGGCGACGATCTGATGCGGCCGCAGCTCTGCGACGAAGCGCTGCGCCTGGGGCGCATCCTCGCCGCGCTGATGCCGCGCGAGGCCGAAGTGCATGGCCTGCTCGCATTGATGGAGATCCAGGCCTCGCGCGCGCCGGCCCGCGTCGACGGTCACGGCGATCCGGTGCTGCTGCTGGAACAGGACCGCGCGCGCTGGGACCGGCTGCTGATCCGCCGCGGCCTGGCCGGCTTGAAGCGCGCCGAGGATCTCGGCGGTTCTCTCGGTCCGTATGCGCTGCAGGCCGCGATCGCCGCCTGCCATGCGCGTGCGCGCACCGCGGCCGATACCGACTGGCTGCGCATCGCCGCACTGTACGGCGCGCTGACCCAGGTGCTGCCGTCGCCGGTCGTCGAGCTCAATCGCGCGATGGCCGTGGCCATGGCCTTCGGTCCGGCCGCAGGCCTGGCCATCGCCGACGCGCTGCAGGACGAGCCGTCGCTGCAGAGCTATCACCTGCTGCCGAGCGTGCGTGCGGATCTGCTCGCCAGGCTCGGCCGCGGCACCGACGCGGCGGCCGAATTCCGCCGCGCCGCGGCGCTGACGCGCAATGCGCGCGAGCAGGCGCTGCTGCTGCGTCGCGCCGAGAGCTGCGGCGCAACCAGCTAG
PROTEIN sequence
Length: 421
MSAASQTAVATVWRMESTRLIGGLMRLVRDLSLAEDLAQDALVAALEQWPASGVPDNPGAWLMAAAKHRAIDRLRRNDMAQRKHDELGAEHELQQLLQAPDGDALDDGVGDDVLRLIFIACHPVLSGEARAALTLRLIAGLTTDEIARAFLQSEPTIAQRIVRAKRSLSAANVPFELPPAGELAQRLSSVLGVIYLIFNEGYAATAGDDLMRPQLCDEALRLGRILAALMPREAEVHGLLALMEIQASRAPARVDGHGDPVLLLEQDRARWDRLLIRRGLAGLKRAEDLGGSLGPYALQAAIAACHARARTAADTDWLRIAALYGALTQVLPSPVVELNRAMAVAMAFGPAAGLAIADALQDEPSLQSYHLLPSVRADLLARLGRGTDAAAEFRRAAALTRNAREQALLLRRAESCGATS*