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SCNpilot_bf_inoc_scaffold_32_curated

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Displaying items 1-30 of 352 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_32_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..901
DNA (900bp) protein (300aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3R5_9RHIZ
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EHK52373.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K13582 localization factor PodJL
SCNpilot_bf_inoc_scaffold_32_curated_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2333..3607
DNA (1275bp) protein (425aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A5A8
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KGM57759.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein; K07007
SCNpilot_bf_inoc_scaffold_32_curated_3
Lysobacter enzymogenes, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4758..6806
DNA (2049bp) protein (683aa)
glycoside hydrolase family protein; K01183 chitinase [EC:3.2.1.14]
Chitinase A n=1 Tax=Lysobacter enzymogenes RepID=Q09IY6_LYSEN
Chitinase A {ECO:0000313|EMBL:ABI63600.1}; TaxID=69 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter enzymogenes.;"
SCNpilot_bf_inoc_scaffold_32_curated_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7206..7763
DNA (558bp) protein (186aa)
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF5_GEMAT
sigma factor, ECF-like family protein
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:BAH40882.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_bf_inoc_scaffold_32_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7756..10554
DNA (2799bp) protein (933aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FAA29
Uncharacterized protein {ECO:0000313|EMBL:AKC87484.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_bf_inoc_scaffold_32_curated_6
unknown

Not on your lists

comp(10650..11021)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_7
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11286..13592)
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0003173F4F
RTX toxins family Ca2+-binding protein {ECO:0000313|EMBL:EGJ30716.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
BNR repeat-containing protein rbh
SCNpilot_bf_inoc_scaffold_32_curated_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13946..14812
DNA (867bp) protein (289aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B39035
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_32_curated_9
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14873..15577)
DNA (705bp) protein (235aa)
rsuA; ribosomal small subunit pseudouridine synthase a protein (EC:4.2.1.70); K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
Pseudouridine synthase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UG91_XANAP
SCNpilot_bf_inoc_scaffold_32_curated_10
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15574..16620)
DNA (1047bp) protein (349aa)
rsmC; ribosomal rna small subunit methyltransferase c protein (EC:2.1.1.171); K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F2D0FB
Uncharacterized protein {ECO:0000313|EMBL:KFN48060.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
SCNpilot_bf_inoc_scaffold_32_curated_11
unknown

Not on your lists

16769..17956
DNA (1188bp) protein (396aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_12
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18013..18432)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN46547.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
Putative uncharacterized protein id=3015827 bin=GWF1_Xanthomonadales_69_6 species=Reinekea blandensis genus=Reinekea taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_13
unknown

Not on your lists

18593..18901
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18901..19818
DNA (918bp) protein (306aa)
Kelch repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBJ1_9BACT
Kelch repeat-containing protein {ECO:0000313|EMBL:EEF62876.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_15
Sphingomonas sp. ALS-13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19949..20725
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WX2_STIAD
Uncharacterized protein {ECO:0000313|EMBL:AJP77081.1}; TaxID=1620224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. ALS-13.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_16
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21087..21857)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IHR0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPL03795.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_17
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21854..22375)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SZY5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KJV26453.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_18
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22463..23170
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B48832
Uncharacterized protein {ECO:0000313|EMBL:EYR69386.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_32_curated_19
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23185..23607
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A034_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL24289.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_bf_inoc_scaffold_32_curated_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23642..24217)
DNA (576bp) protein (192aa)
2'-5' RNA ligase n=1 Tax=Caulobacter sp. AP07 RepID=J2PR27_9CAUL
2'-5' RNA ligase {ECO:0000313|EMBL:EJL30132.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_bf_inoc_scaffold_32_curated_21
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24580..26403
DNA (1824bp) protein (608aa)
PHB depolymerase family esterase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZE4_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:EYR65448.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
PHB depolymerase family esterase
SCNpilot_bf_inoc_scaffold_32_curated_22
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26489..26806)
DNA (318bp) protein (106aa)
Uncharacterized protein id=3765447 bin=GWC2_CP_Nitrospirae-rel_42_7 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_32_curated_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26799..27398)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1N9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EYR66970.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_32_curated_24
unknown

Not on your lists

comp(27570..27968)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_32_curated_25
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28158..28463)
DNA (306bp) protein (102aa)
Multidrug transporter n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HUM5_9GAMM
cation/cationic drug transporter
Cation/cationic drug transporter {ECO:0000313|EMBL:AFT71624.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCNpilot_bf_inoc_scaffold_32_curated_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28778..29818)
DNA (1041bp) protein (347aa)
AraC family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71674
AraC family transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_32_curated_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30062..31288
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003468AC3
Uncharacterized protein {ECO:0000313|EMBL:EYR67758.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_32_curated_28
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31292..32431
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F7573B
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_bf_inoc_scaffold_32_curated_29
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32509..34938
DNA (2430bp) protein (810aa)
TonB-dependent receptor n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5C34D
Uncharacterized protein {ECO:0000313|EMBL:KFN42437.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
TonB dependent receptor
SCNpilot_bf_inoc_scaffold_32_curated_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34994..35710)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003789C73
periplasmic protein-like protein
Periplasmic protein-like protein {ECO:0000313|EMBL:ACS20691.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Displaying items 1-30 of 352 in total

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