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SCNpilot_bf_inoc_scaffold_32_curated

Search features with annotation key words

Displaying items 331-352 of 352 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_32_curated_331
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(404552..404986)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Rudaea cellulosilytica RepID=UPI000364F998
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
SCNpilot_bf_inoc_scaffold_32_curated_332
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(405012..405209)
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYM1_FRAAD
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_bf_inoc_scaffold_32_curated_333
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(405199..405711)
DNA (513bp) protein (171aa)
30S ribosomal protein S5 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C498F
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
SCNpilot_bf_inoc_scaffold_32_curated_334
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(405856..406209)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM87_9GAMM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L18P
SCNpilot_bf_inoc_scaffold_32_curated_335
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(406270..406797)
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LSU ribosomal protein L6P
SCNpilot_bf_inoc_scaffold_32_curated_336
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(406811..407206)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK2_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_bf_inoc_scaffold_32_curated_337
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(407247..407552)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000373523B
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_32_curated_338
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(407570..408109)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4DF36
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ribosomal protein L5
SCNpilot_bf_inoc_scaffold_32_curated_339
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(408121..408435)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Dyella ginsengisoli RepID=UPI0003453922
ribosomal protein L24, bacterial/organelle
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_32_curated_340
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(408449..408817)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ1_PSEUP
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_32_curated_341
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(408840..409103)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 id=2431961 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_32_curated_342
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(409115..409300)
DNA (186bp) protein (62aa)
50S ribosomal protein L29 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ3_PSEUP
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_32_curated_343
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(409300..409713)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Dyella japonica RepID=UPI000305A51A
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_bf_inoc_scaffold_32_curated_344
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(409716..410423)
DNA (708bp) protein (236aa)
Small subunit ribosomal protein S3 n=2 Tax=Xanthomonas RepID=V7ZHI6_9XANT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_bf_inoc_scaffold_32_curated_345
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(410441..410776)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F86420
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_bf_inoc_scaffold_32_curated_346
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(410788..411066)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E0658
SSU ribosomal protein S19P
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_32_curated_347
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(411079..411861)
DNA (783bp) protein (261aa)
50S ribosomal protein L2 n=1 Tax=Rudaea cellulosilytica RepID=UPI000360E4AE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_bf_inoc_scaffold_32_curated_348
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(411919..412209)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B792AD
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_32_curated_349
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(412206..412811)
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYK4_FRAAD
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_bf_inoc_scaffold_32_curated_350
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(412823..413464)
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL69_9GAMM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LSU ribosomal protein L3P
SCNpilot_bf_inoc_scaffold_32_curated_351
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(413498..413809)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=11 Tax=Stenotrophomonas RepID=RS10_STRM5
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_32_curated_352
unknown

Not on your lists

comp(414053..414136)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying items 331-352 of 352 in total

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