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SCNpilot_bf_inoc_scaffold_16_curated_199

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(255416..256036)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 206.0
  • Bit_score: 316
  • Evalue 2.30e-83
23S rRNA methylase; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 205.0
  • Bit_score: 307
  • Evalue 3.20e-81
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK53_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 206.0
  • Bit_score: 316
  • Evalue 1.70e-83

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGTCACGCAGCAAAAGCAGCCAGCGCTGGCTGCAGGAACATTTCAAGGATCCCTACGTCAAGAAGGCTCAGGCGGAGGGCTACCGTTCGCGCGCGGTATTCAAGCTCGACGAGCTGATCGAGCGCGACGACCTGCTCAAGCCCGGCATGACCGTCGTGGATCTCGGCGCCGCCCCGGGCGGCTGGTCGCAGCTGGTCAACGAAAGGCTCAAGGGACGCGGCCGTATCGTCGCGCTCGACATCCTGCCGATGCAGGGCATTTCCGGCGTCGACTTCATCTGCGGCGATTTCCGCGAGGACGCCGTGCTGGCCGAACTCGAATCGCGACTGCAGGGCGCCACGGTGGATCTTGTGCTGTCGGACATGGCCCCCAATATGAGCGGCGTGGATCTCGTCGACCAGGCGCGTGCCATGCATCTGTCTGAACTGGCGTTGGATTTCGCCAGTCGCTGGCTCAGGCCCGGTGGCGATTTCCTGATCAAACTGTTCCAGGGCGTTGGATTCGACGACTACGTCAGAAGCTTGCGGACGGCCTTTACGCGCGTCAGCATCCGTAAACCCAAGGCTTCGCGGGCGCGATCCAACGAAGTCTATGCACTGGCCCGGGGCCGGCGCGCGTAA
PROTEIN sequence
Length: 207
MSRSKSSQRWLQEHFKDPYVKKAQAEGYRSRAVFKLDELIERDDLLKPGMTVVDLGAAPGGWSQLVNERLKGRGRIVALDILPMQGISGVDFICGDFREDAVLAELESRLQGATVDLVLSDMAPNMSGVDLVDQARAMHLSELALDFASRWLRPGGDFLIKLFQGVGFDDYVRSLRTAFTRVSIRKPKASRARSNEVYALARGRRA*