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SCNpilot_bf_inoc_scaffold_16_curated

Search features with annotation key words

Displaying items 1-30 of 540 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_16_curated_1
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98..991
DNA (894bp) protein (298aa)
hypothetical protein, partial n=1 Tax=Psychromonas ossibalaenae RepID=UPI00035CFCED
Uncharacterized protein {ECO:0000313|EMBL:AJD48978.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_2
unknown

Not on your lists

1323..1949
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2169..4418
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DF026
Calx-beta domain-containing protein
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
SCNpilot_bf_inoc_scaffold_16_curated_4
GWE2_TM6_36_25, TM6, Bacteria

Not on your lists

comp(4758..6347)
DNA (1590bp) protein (530aa)
Putative uncharacterized protein id=2301675 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
Tax=GWE2_TM6_36_25
SCNpilot_bf_inoc_scaffold_16_curated_5
unknown

Not on your lists

7092..7478
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_6
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7548..8231)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMM8_PSEUO
Transcriptional regulator {ECO:0000313|EMBL:KES22508.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
response regulator; K07664 two-component system, OmpR family, response regulator BaeR
SCNpilot_bf_inoc_scaffold_16_curated_7
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8228..9748)
DNA (1521bp) protein (507aa)
integral membrane sensor signal transduction histidine kinase; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7F8C
Membrane protein {ECO:0000313|EMBL:KJK04812.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
SCNpilot_bf_inoc_scaffold_16_curated_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9911..12622
DNA (2712bp) protein (904aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULW5_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49003.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_bf_inoc_scaffold_16_curated_9
unknown

Not on your lists

13102..13689
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13965..14198)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14195..14335)
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_16_curated_12
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14720..15112
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TC32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEZ77370.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_13
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..16756
DNA (1122bp) protein (374aa)
Histidine kinase family id=2992325 bin=GWF1_Xanthomonadales_69_6 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase LytS
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_16_curated_14
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16753..17514
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DNA-binding response regulator
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_16_curated_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17915..18463
DNA (549bp) protein (183aa)
Uncharacterized protein id=2992324 bin=GWF1_Xanthomonadales_69_6 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_16_curated_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18972..20507
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53087.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Ferredoxin reductase id=2941011 bin=GWF1_Xanthomonadales_69_6 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
oxygenase
SCNpilot_bf_inoc_scaffold_16_curated_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20616..22331)
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q62XX1_BACLD
Triple helix repeat-containing collagen {ECO:0000313|EMBL:AGC43913.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_18
unknown

Not on your lists

comp(22334..22651)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_19
unknown

Not on your lists

22924..23256
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23501..24562
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=Q8P846_XANCP
Uncharacterized protein {ECO:0000313|EMBL:EYR65422.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_16_curated_21

Not on your lists

25160..25429
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S03H2_S18136 {ECO:0000313|EMBL:GAH65137.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_16_curated_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25426..27072
DNA (1647bp) protein (549aa)
Triple helix repeat-containing collagen n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBB5_MYXFH
Phage tail fiber protein {ECO:0000313|EMBL:KFE68250.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
triple helix repeat-containing collagen
SCNpilot_bf_inoc_scaffold_16_curated_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27263..32695)
DNA (5433bp) protein (1811aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E5018
Fibronectin type III domain protein {ECO:0000313|EMBL:ADX44575.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
fibronectin type III domain-containing protein
SCNpilot_bf_inoc_scaffold_16_curated_24
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32952..36056)
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362E7BC
Uncharacterized protein {ECO:0000313|EMBL:EFK07421.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36272..37732
DNA (1461bp) protein (487aa)
Heat shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVQ4_9GAMM
Heat shock protein {ECO:0000313|EMBL:EIL91295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
heat shock protein; K04046 hypothetical chaperone protein
SCNpilot_bf_inoc_scaffold_16_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37863..38579
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003819605
Uncharacterized protein {ECO:0000313|EMBL:EIL95196.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_27
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

39170..45043
DNA (5874bp) protein (1958aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003803750
putative extracellular nuclease
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_bf_inoc_scaffold_16_curated_28
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45292..45969)
DNA (678bp) protein (226aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Type 12 methyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4PFB5_9BURK
Type 12 methyltransferase {ECO:0000313|EMBL:EJO32477.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
SCNpilot_bf_inoc_scaffold_16_curated_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46068..46547)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ85_RAMTT
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KGH11827.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_30
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46885..47598
DNA (714bp) protein (238aa)
Putative uncharacterized protein orf240 n=1 Tax=Xanthomonas campestris pv. vitians RepID=Q5BMX0_XANCA
Putative uncharacterized protein orf240 {ECO:0000313|EMBL:AAX24151.1}; TaxID=83224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vitians.;"
hypothetical protein
Displaying items 1-30 of 540 in total

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