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SCNpilot_bf_inoc_scaffold_16_curated

Search features with annotation key words

Displaying items 91-120 of 540 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_16_curated_91
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128984..129364
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D723D
Uncharacterized protein {ECO:0000313|EMBL:EGZ45799.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
hypothetical protein; K09153 hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_92
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129375..130535
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DVH6_9GAMM
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGV33991.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
group 1 glycosyl transferase
SCNpilot_bf_inoc_scaffold_16_curated_93
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130465..132039)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036AE9B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29182.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
SCNpilot_bf_inoc_scaffold_16_curated_94
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132036..133229)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380A4D2
Putative uncharacterized protein {ECO:0000313|EMBL:EGV19363.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
SCNpilot_bf_inoc_scaffold_16_curated_95
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133229..134044)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8E8_9GAMM
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_16_curated_96
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134160..134945
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP45_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99547.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_bf_inoc_scaffold_16_curated_97
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134991..136466)
DNA (1476bp) protein (492aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Amidophosphoribosyltransferase; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F0_9GAMM
SCNpilot_bf_inoc_scaffold_16_curated_98
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136480..137061)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375F050
Uncharacterized protein {ECO:0000313|EMBL:GAN45903.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative membrane protein, required for colicin V production
SCNpilot_bf_inoc_scaffold_16_curated_99
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137075..138022)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F0823
Uncharacterized protein {ECO:0000313|EMBL:KGI78382.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_100
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(138089..139321)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003610237
folylpolyglutamate synthase/dihydrofolate synthase
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:AGG88565.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_16_curated_101
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139387..140280)
DNA (894bp) protein (298aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382CE81
acetyl-CoA carboxylase carboxyltransferase subunit alpha
SCNpilot_bf_inoc_scaffold_16_curated_102
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140387..141205)
DNA (819bp) protein (273aa)
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter denitrificans RepID=I4WLF4_9GAMM
SCNpilot_bf_inoc_scaffold_16_curated_103
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141248..142456)
DNA (1209bp) protein (403aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F5FB5
SCNpilot_bf_inoc_scaffold_16_curated_104
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142453..143127)
DNA (675bp) protein (225aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFV5_9GAMM
SCNpilot_bf_inoc_scaffold_16_curated_105
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143124..143891)
DNA (768bp) protein (256aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
pseudouridylate synthase I; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Dyella ginsengisoli RepID=UPI00035E89A3
SCNpilot_bf_inoc_scaffold_16_curated_106
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144030..146708)
DNA (2679bp) protein (893aa)
FimV N-terminal domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLA0_9GAMM
FimV N-terminal domain protein
FimV N-terminal domain protein {ECO:0000313|EMBL:AGG88496.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_16_curated_107
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146960..147997)
DNA (1038bp) protein (346aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCW3_9GAMM
SCNpilot_bf_inoc_scaffold_16_curated_108
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148059..149156)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003815790
SCNpilot_bf_inoc_scaffold_16_curated_109
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149223..150143)
DNA (921bp) protein (307aa)
(LSU ribosomal protein L3P)-glutamine N5-methyltransferase (EC:2.1.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D696
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EIL87582.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_bf_inoc_scaffold_16_curated_110
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150217..150855
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717583
Uncharacterized protein {ECO:0000313|EMBL:KFN45676.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
SCO1/SenC family protein; K07152
SCNpilot_bf_inoc_scaffold_16_curated_111
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150855..151697
DNA (843bp) protein (281aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
phosphatidylserine decarboxylase n=1 Tax=Dyella ginsengisoli RepID=UPI000346B2E8
phosphatidylserine decarboxylase precursor
SCNpilot_bf_inoc_scaffold_16_curated_112
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151836..152273
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003488CED
Uncharacterized protein {ECO:0000313|EMBL:AHX13825.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_113
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152447..153970)
DNA (1524bp) protein (508aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W661_9GAMM
Lytic transglycosylase {ECO:0000313|EMBL:KGI77316.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
soluble lytic murein transglycosylase-like protein
SCNpilot_bf_inoc_scaffold_16_curated_114
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154111..155613
DNA (1503bp) protein (501aa)
ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0002DC408C
Uncharacterized protein {ECO:0000313|EMBL:AIF48574.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative ATPase
SCNpilot_bf_inoc_scaffold_16_curated_115
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155672..156943
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z3Z0_XANCT
Membrane protein {ECO:0000313|EMBL:KGM57179.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_116
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(157160..158551)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034D2D93
ATPase, AAA family {ECO:0000313|EMBL:EKF01526.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
ATPase AAA rbh
SCNpilot_bf_inoc_scaffold_16_curated_117
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158595..162491)
DNA (3897bp) protein (1299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003757E83
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_bf_inoc_scaffold_16_curated_118
unknown

Not on your lists

comp(162499..163350)
DNA (852bp) protein (284aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_16_curated_119
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163639..165180)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum RepID=D8N1Z8_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EYR70121.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_120
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165249..166721)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZVB1_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM90275.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Displaying items 91-120 of 540 in total

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