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SCNpilot_bf_inoc_scaffold_568_curated_5

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2937..3788)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP- similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 262.0
  • Bit_score: 337
  • Evalue 2.30e-89
ksgA; KsgA/Dim1 family 16S ribosomal RNA methyltransferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 260.0
  • Bit_score: 328
  • Evalue 2.40e-87
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D95E9 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 258.0
  • Bit_score: 354
  • Evalue 1.30e-94

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
TTGAAGCGCTACCCGCCTGCCAATGCCACCGACGCCGCTGTCGCGACGCCGGACCGCCATGTACACAAAAAACAATTTGGACAACACTTCCTGCACGACCCGGGCCTGATCCGGCGCATCGTGCAGGCGATCGCGCCGAAGCCCGGCGACCGTCTCGTCGAGATCGGTCCCGGCGAAGGCGCGATCACCCTGCCGCTGCTGCGCGAACATGGCCGTCTGACCGTGATCGAGCTCGACCGCGATCTGATTCCGCGCATCCGCGCCGCGGCCGAAGGCATCGGCGAACTCGATGTCGTCCATGCCGACGTGCTGACCGTGGACTTCACGGCGCTGGCTGCCGGCACGACGCTGCGCCTCGTCGGCAATCTGCCGTACAACATTTCCAGCCCGATCCTGTTCCACTGCCTGGACCATGCCGAGTCCATCGTCGACATGCACTTCATGCTGCAGAAGGAAGTCGTCGACCGCATGGCCGCGGCACCGGGCAGCAAGGTCTACGGCCGGCTGAGCGTGATGCTGCAGCTGTACTGCACGGTCGAGCCGCTCATCAAGGTGCCGCCGGGCGCATTCAACCCGCCGCCGAAGGTCGACTCTGCGGTCGTGCGCCTGACGCCGCTGCCGGCCGCGCGCCGCCACGATGCCGACCGGGCGCTCGTCGAGCGCGTCGTGCGGCACGCCTTCGGCCAGCGCCGCAAGACCCTGTCCAATGCGCTGCACGGCGTGGCGACCGCGGCGCAGATCGAAACGGCCGGCGTCGACCCGCGCGCGCGCGCCGAGCAGCTGGAACCACTGCAGTTCGTCGCGATCGCGAAGGTCATCGCCGCGGAAGCCGCCGACGGCGGAGCCGGCTGA
PROTEIN sequence
Length: 284
LKRYPPANATDAAVATPDRHVHKKQFGQHFLHDPGLIRRIVQAIAPKPGDRLVEIGPGEGAITLPLLREHGRLTVIELDRDLIPRIRAAAEGIGELDVVHADVLTVDFTALAAGTTLRLVGNLPYNISSPILFHCLDHAESIVDMHFMLQKEVVDRMAAAPGSKVYGRLSVMLQLYCTVEPLIKVPPGAFNPPPKVDSAVVRLTPLPAARRHDADRALVERVVRHAFGQRRKTLSNALHGVATAAQIETAGVDPRARAEQLEPLQFVAIAKVIAAEAADGGAG*