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SCNpilot_bf_inoc_scaffold_33_curated_138

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 169905..171776

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase-like flavoprotein n=1 Tax=Pseudomonas sp. GM80 RepID=J3DTZ2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 634.0
  • Bit_score: 668
  • Evalue 6.80e-189
Oxidoreductase {ECO:0000313|EMBL:EZP62764.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 631.0
  • Bit_score: 673
  • Evalue 2.30e-190
glucose-methanol-choline (GMC) oxidoreductase:NAD binding site similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 615.0
  • Bit_score: 646
  • Evalue 1.10e-182

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Taxonomy

Pseudomonas sp. RIT357 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGAGCAGCGCACCGACCGTCTATGACGCCGTCATCGTCGGCGCCGGCGCGTCCGGCTCCATCATCGCCAAGCAGCTCGGCCTGGCCGGCAAGAAGGTGCTCGTGCTCGAGGCGGGCGCCGGCGTGCCGCCGAACATCAATGCGTTCATGCAGCGCTTCTACACCTCGGTCGCCAAGACGCCCGAGTCGCCGTATACGCCCGATCTGTTCACGCCGCCGGGCAGCGGCGATCTGACCGATCCGTCGACCCTGGCCGCCGGCCGTCCGACCGTGCTGACCCTGCGCGCGGACAACTGGCAGGACCCGCACCAGGCCTATCTGATCCAGCAGGGCCCGAAGGCCTTCGCGAGCACCTACGAACGCGTCGCCGGCGGCACGATGCGGCATTGGCTCGGTACGAGCCTGCGTTTCCTGCCGAGCGACTTCGAGATGCAGACGAAGTACCGGCAGGAAGTCGACTGGCCGCTGAGCTATGCGGACCTCGATCCCTGGTACGGCGCAGCCGAGTCCGAGATCGGCGTGTCGGCGAATGCGGCCGAGCAGTCGTTCCTCGGCATCACGTTCCCGCCAGGCTACAGCTATCCGATGCAGGCGATTCCGCACAGCCTCGTCGACGACGCCGTCGACGCGGCGACCCGGGGCATGACCTGGGAGGGGCTGCCCGTGAACGTGACCGGCACGCCGGCCGGGCGCAATTCGCAGCCGTACCAGAACCGCCGCGTCTGCGCCGGCAACACCAATTGCATTCCGATCTGCCCGATACAGGCGAAATACGATCCGAGCGTCAGCCTCAATGCGGCACTGGACACCGGCAATGTCACCTTGTGGCCGCAGACCGTCGCGAGCCACGTGCGCATCGCCGACGACGGCACGGTCAGCGGCATCGACTACCTGCAGTACCAGCAGGTCAGCGGGCCGGCCACGGGCGGCGGCACCGCCGTGGGCAAGATCTACGTGATCGCCGCGCACGCGATAGAAACGCCGCGTCTGCTGCTGATGTCGACCAACGACGGCCGCTACCCGCACGGCGTCGCCAACAGCAGCGGCCTCGTCGGGCAAAACCTCATGGACCACCCGCTGTACCTGGCCTGGGCGCTCGCGCCGCAGCCGGTATGGCCGTACCGCGGCCCGCTTGCGACCGCCGGCATCGAAAGCCTGCGCGACGGCGACTTCCGCAGCGAACGCGCCGCGTTCCGCATCGAGATCGGCAACGAGGGCTGGAACTTCGCGATCGGCGATCCGGACACGACGACCGTGGACTTCATCAACGGCATGAACGCGAGCGGCCTGAATCCGCCGCCGGCCGGCGGCGCACCGGCGGCGCTCTGGGGCAGCGCCCTGGTCGCCGCGCTGAACGACGGCCTGTCGCGCCAGTTCCGCCTCGGCTTCCTCGTCGAGCAGTCGCCCGAGAGCAGCAACTACGTCAGCCTGTCCGACGAGCTCGATCCGCTGGGCCTGCCGCGGCCGGCGATCCACTACGACCTGTCGGACTACACCAAGAAGGGCTTCGTCGCCGCCAAGCAGGTCGCCGACGCGATCTTCGCCCGGATGGGTGCAACCCAGTTCACCACGGTGCCGGCCGAAGGGCCGACGACGTTCGATTACGTCGTCGACGGCCAGCCCACCCGCTTCCGCTACTTCGGCGCCGGCCACATCGTCGGCACCTACCGCATGGGCAGCGAGAAGAACAATTCCGTGGTCGACGCCGACCAGCGCAGTTGGGACCACCCGAACCTGTTCCTCGTCGGCAGCGGTACCTTCCCGACCGTGACCACGGCCAATCCGACCCTGACGATCGCTGCGTTGAGCCTGAAAACCGCAAAGGCGATCGTGGAACAGCTGAACCAGCCGTCAGGCGGTGCGGACCGGTGA
PROTEIN sequence
Length: 624
MSSAPTVYDAVIVGAGASGSIIAKQLGLAGKKVLVLEAGAGVPPNINAFMQRFYTSVAKTPESPYTPDLFTPPGSGDLTDPSTLAAGRPTVLTLRADNWQDPHQAYLIQQGPKAFASTYERVAGGTMRHWLGTSLRFLPSDFEMQTKYRQEVDWPLSYADLDPWYGAAESEIGVSANAAEQSFLGITFPPGYSYPMQAIPHSLVDDAVDAATRGMTWEGLPVNVTGTPAGRNSQPYQNRRVCAGNTNCIPICPIQAKYDPSVSLNAALDTGNVTLWPQTVASHVRIADDGTVSGIDYLQYQQVSGPATGGGTAVGKIYVIAAHAIETPRLLLMSTNDGRYPHGVANSSGLVGQNLMDHPLYLAWALAPQPVWPYRGPLATAGIESLRDGDFRSERAAFRIEIGNEGWNFAIGDPDTTTVDFINGMNASGLNPPPAGGAPAALWGSALVAALNDGLSRQFRLGFLVEQSPESSNYVSLSDELDPLGLPRPAIHYDLSDYTKKGFVAAKQVADAIFARMGATQFTTVPAEGPTTFDYVVDGQPTRFRYFGAGHIVGTYRMGSEKNNSVVDADQRSWDHPNLFLVGSGTFPTVTTANPTLTIAALSLKTAKAIVEQLNQPSGGADR*