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SCNpilot_bf_inoc_scaffold_33_curated

Search features with annotation key words

Displaying items 121-150 of 566 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_33_curated_121
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141725..143644
DNA (1920bp) protein (640aa)
conditioned medium factor n=2 Tax=Xanthomonas RepID=UPI0003778CF2
Conditioned medium factor {ECO:0000313|EMBL:AJC46295.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
cmfA; conditioned medium factor
SCNpilot_bf_inoc_scaffold_33_curated_122
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(143718..144089)
DNA (372bp) protein (124aa)
SnoaL-like polyketide cyclase. (EC:5.3.3.1)
steroid delta-isomerase n=1 Tax=Nevskia ramosa RepID=UPI0003B5D29A
Tax=GWA2_Ignavibacteria_54_16_curated
SCNpilot_bf_inoc_scaffold_33_curated_123
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144298..145878
DNA (1581bp) protein (527aa)
Amidohydrolase id=2588162 bin=GWF1_Xanthomonadales_69_6 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
amidohydrolase
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_33_curated_124
unknown

Not on your lists

comp(145958..146239)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_125
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146709..148103
DNA (1395bp) protein (465aa)
endoproteinase ArgC n=1 Tax=Xanthomonas sacchari RepID=UPI000262B0F5
Endoproteinase ArgC {ECO:0000313|EMBL:AJC45442.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
endoproteinase ArgC
SCNpilot_bf_inoc_scaffold_33_curated_126
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148184..148531)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000315BCDA
Phosphate starvation-inducible protein PsiF {ECO:0000313|EMBL:AIF47340.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PsiF repeat family protein
SCNpilot_bf_inoc_scaffold_33_curated_127
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149027..150469
DNA (1443bp) protein (481aa)
Chitin binding protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G408_STEMA
Chitin-binding protein CbpD {ECO:0000313|EMBL:EZP44456.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
chitin-binding protein; K03933 chitin-binding protein
SCNpilot_bf_inoc_scaffold_33_curated_128
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150696..152231
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DI32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU83913.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_129
unknown

Not on your lists

152241..153767
DNA (1527bp) protein (509aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_130
unknown

Not on your lists

153847..155394
DNA (1548bp) protein (516aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_131
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155540..158494
DNA (2955bp) protein (985aa)
ABC transporter substrate-binding protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B34ACD
Uncharacterized protein {ECO:0000313|EMBL:KFN42926.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
putative periplasmic ligand-binding sensor protein
SCNpilot_bf_inoc_scaffold_33_curated_132
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158711..159460)
DNA (750bp) protein (250aa)
Albicidin resistance domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8ML82_CORCM
nolA; albicidin resistance domain-containing protein
Albicidin resistance domain-containing protein {ECO:0000313|EMBL:AFE09618.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCNpilot_bf_inoc_scaffold_33_curated_133
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159495..160772)
DNA (1278bp) protein (426aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Sphingobium sp. AP49 RepID=J2LBR3_9SPHN
Peptidase M19 {ECO:0000313|EMBL:AJP71774.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase M19
SCNpilot_bf_inoc_scaffold_33_curated_134
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161228..164536)
DNA (3309bp) protein (1103aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037B4302
Uncharacterized protein {ECO:0000313|EMBL:EYR66783.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ClpB family protein
SCNpilot_bf_inoc_scaffold_33_curated_135
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165391..167529
DNA (2139bp) protein (713aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003803CC3
Uncharacterized protein {ECO:0000313|EMBL:KFN51063.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
peptidase M12B ADAM/reprolysin
SCNpilot_bf_inoc_scaffold_33_curated_136
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168004..169386
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AEEFB4
Uncharacterized protein {ECO:0000313|EMBL:ERL51989.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_137
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169411..169908
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pseudomonas synxantha BG33R RepID=I4L9T8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AKA81847.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_138
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169905..171776
DNA (1872bp) protein (624aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Pseudomonas sp. GM80 RepID=J3DTZ2_9PSED
Oxidoreductase {ECO:0000313|EMBL:EZP62764.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
glucose-methanol-choline (GMC) oxidoreductase:NAD binding site
SCNpilot_bf_inoc_scaffold_33_curated_139
unknown

Not on your lists

comp(171844..172218)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_140

Not on your lists

comp(173092..173472)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72435.1}; TaxID=1256558 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
SCNpilot_bf_inoc_scaffold_33_curated_141

Not on your lists

comp(174807..175253)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO04027.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_bf_inoc_scaffold_33_curated_142
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175759..176124
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXR0_METFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE50977.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
SCNpilot_bf_inoc_scaffold_33_curated_143
unknown

Not on your lists

176330..176464
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_144
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176533..176817
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C30D4
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_33_curated_145
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176821..177918
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D32DF
Uncharacterized protein {ECO:0000313|EMBL:KFL36265.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_146
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178040..178795)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94362.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_bf_inoc_scaffold_33_curated_147
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178883..180097)
DNA (1215bp) protein (405aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6447C
Uncharacterized protein {ECO:0000313|EMBL:KFN41201.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Benzoate permease; K05782 benzoate membrane transport protein
SCNpilot_bf_inoc_scaffold_33_curated_148
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180282..180620
DNA (339bp) protein (113aa)
ArsR family transcriptional regulator n=39 Tax=Bordetella RepID=F4LE12_BORPC
arsR family transcriptional regulator
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:CCN21707.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_bf_inoc_scaffold_33_curated_149
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180928..181437
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365A982
Activator of HSP90 ATPase {ECO:0000313|EMBL:AHB07073.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_150
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182126..184135
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9W2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT68629.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein; K07047
Displaying items 121-150 of 566 in total

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