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SCNpilot_bf_inoc_scaffold_33_curated

Search features with annotation key words

Displaying items 91-120 of 566 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_33_curated_91
unknown

Not on your lists

comp(105250..108069)
DNA (2820bp) protein (940aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_92
unknown

Not on your lists

comp(108492..108782)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_93
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109028..109678)
DNA (651bp) protein (217aa)
Keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:AIF46437.1}; EC=4.1.2.14 {ECO:0000313|EMBL:AIF46437.1};; EC=4.1.3.16 {ECO:0000313|EMBL:AIF46437.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
ketohydroxyglutarate aldolase n=1 Tax=Dyella japonica RepID=UPI0002DB07C9
SCNpilot_bf_inoc_scaffold_33_curated_94
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109675..111501)
DNA (1827bp) protein (609aa)
phosphogluconate dehydratase n=1 Tax=Dyella ginsengisoli RepID=UPI000345B2AA
Phosphogluconate dehydratase {ECO:0000313|EMBL:AIF46436.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
6-phosphogluconate dehydratase
SCNpilot_bf_inoc_scaffold_33_curated_95
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111604..112362)
DNA (759bp) protein (253aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK6_9GAMM
6-phosphogluconolactonase
6-phosphogluconolactonase {ECO:0000313|EMBL:AGG87311.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_33_curated_96
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112346..113821)
DNA (1476bp) protein (492aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP84_9GAMM
glucose-6-phosphate 1-dehydrogenase
SCNpilot_bf_inoc_scaffold_33_curated_97
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114129..114881
DNA (753bp) protein (251aa)
GntR family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000347F9BA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87313.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_33_curated_98
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114903..115946
DNA (1044bp) protein (348aa)
glmS; glucosamine-fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glutamine-fructose-6-phosphate transaminase n=3 Tax=Xanthomonas axonopodis RepID=H1XC37_9XANT
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:EKQ61447.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
SCNpilot_bf_inoc_scaffold_33_curated_99
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115946..117091
DNA (1146bp) protein (382aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E5_9GAMM
N-acetylglucosamine-6-phosphate deacetylase
SCNpilot_bf_inoc_scaffold_33_curated_100
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117241..119460
DNA (2220bp) protein (740aa)
TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=T1B0V5_9ZZZZ
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45704.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
outer membrane receptor protein
SCNpilot_bf_inoc_scaffold_33_curated_101
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120284..121915
DNA (1632bp) protein (544aa)
TldD protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382B284
Peptidase u62 modulator of DNA gyrase {ECO:0000313|EMBL:EIT68729.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
peptidase U62 modulator of DNA gyrase; K03568 TldD protein
SCNpilot_bf_inoc_scaffold_33_curated_102
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121933..123273
DNA (1341bp) protein (447aa)
TldD protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377D44A
Peptidase u62 modulator of DNA gyrase {ECO:0000313|EMBL:EIT68730.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
peptidase u62 modulator of DNA gyrase
SCNpilot_bf_inoc_scaffold_33_curated_103
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123344..124042
DNA (699bp) protein (233aa)
DUF4159 domain containing protein {ECO:0000313|EMBL:KGQ19352.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Putative uncharacterized protein id=2635557 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_104
unknown

Not on your lists

comp(124050..124334)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_105
unknown

Not on your lists

comp(124674..124802)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_106
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124814..125197)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TDM4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04562.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
SCNpilot_bf_inoc_scaffold_33_curated_107
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125575..126573
DNA (999bp) protein (333aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase AAA n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F82FF
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_33_curated_108
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126680..127576
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51720.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Uncharacterized protein id=2635563 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_109
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127573..128745
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003644D87
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER57060.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_33_curated_110
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128742..130877
DNA (2136bp) protein (712aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374E44B
Uncharacterized protein {ECO:0000313|EMBL:KFL36993.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_111
unknown

Not on your lists

130874..131017
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_112
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131014..132786
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B8229
Uncharacterized protein {ECO:0000313|EMBL:KFN46234.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_113
unknown

Not on your lists

133028..133441
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_114
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133785..135911)
DNA (2127bp) protein (709aa)
phospholipase c precursor (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
Putative phospholipase c protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCE2_XANAP
Phospholipase C {ECO:0000313|EMBL:EYR67934.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_bf_inoc_scaffold_33_curated_115
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136065..136457)
DNA (393bp) protein (131aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P8_9GAMM
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:EIL94789.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MAPEG family
SCNpilot_bf_inoc_scaffold_33_curated_116
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136638..137123
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030561C8
Uncharacterized protein {ECO:0000313|EMBL:EYR67093.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
transcription elongation factor
SCNpilot_bf_inoc_scaffold_33_curated_117
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137172..137795)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037E90F3
Short-chain dehydrogenase {ECO:0000313|EMBL:KES21381.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
short chain dehydrogenase
SCNpilot_bf_inoc_scaffold_33_curated_118
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137921..138859)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003663660
AraC family transcriptional regulator {ECO:0000313|EMBL:EIT70433.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_33_curated_119
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139027..140025
DNA (999bp) protein (333aa)
aldo/keto reductase n=1 Tax=Nevskia ramosa RepID=UPI0003B5E6F8
Aldo/keto reductase {ECO:0000313|EMBL:KGM40876.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
aldo/keto reductase
SCNpilot_bf_inoc_scaffold_33_curated_120

Not on your lists

140336..141265
DNA (930bp) protein (310aa)
Metallo-beta-lactamase n=1 Tax=Janthinobacterium lividum RepID=A0SYY8_9BURK
L1_beta_lactamase {ECO:0000313|EMBL:AIA11259.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying items 91-120 of 566 in total

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