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SCNpilot_bf_inoc_scaffold_33_curated

Search features with annotation key words

Displaying items 61-90 of 566 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_33_curated_61
unknown

Not on your lists

comp(67053..67559)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_62
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67804..69408
DNA (1605bp) protein (535aa)
electron transfer flavoprotein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365DC3D
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:KGI78520.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
flavin-dependent dehydrogenase
SCNpilot_bf_inoc_scaffold_33_curated_63
unknown

Not on your lists

69411..70151
DNA (741bp) protein (247aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_64
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70229..70759
DNA (531bp) protein (177aa)
ubiquinone biosynthesis protein Coenzyme Q7 Coq7 family protein; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
5-demethoxyubiquinone hydroxylase, mitochondrial {ECO:0000256|SAAS:SAAS00231976}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00276250};; EC=1.14.13.- {ECO:0000256|SAAS:SAAS00231964};; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
Ubiquinone biosynthesis protein Coenzyme Q7 Coq7 family protein n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BUA5_TERTT
SCNpilot_bf_inoc_scaffold_33_curated_65
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70771..71166)
DNA (396bp) protein (132aa)
Glyoxylase I family protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EW90_PSEST
lactoylglutathione lyase-like lyase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_33_curated_66
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(71263..74121)
DNA (2859bp) protein (953aa)
ial:IALB_1275 Glycosyl hydrolase id=720100 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Glycosyl hydrolase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_bf_inoc_scaffold_33_curated_67
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74268..74711)
DNA (444bp) protein (148aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_33_curated_68
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74708..75271)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DC29C
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL93509.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_bf_inoc_scaffold_33_curated_69
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75449..75772
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349762E
Membrane protein {ECO:0000313|EMBL:KGQ18137.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_70
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75929..76732
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I2L6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD66781.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_71
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76799..79516)
DNA (2718bp) protein (906aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003450F30
Serine/threonine protein kinase {ECO:0000313|EMBL:KCZ97119.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
serine/threonine protein kinase
SCNpilot_bf_inoc_scaffold_33_curated_72
unknown

Not on your lists

79795..81414
DNA (1620bp) protein (540aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_73
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81622..82494)
DNA (873bp) protein (291aa)
Permease n=1 Tax=mine drainage metagenome RepID=T1DDT2_9ZZZZ
Membrane protein {ECO:0000313|EMBL:KGI77645.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative permease, DMT superfamily
SCNpilot_bf_inoc_scaffold_33_curated_74
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82683..83399
DNA (717bp) protein (239aa)
RNA polymerase sigma 70 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5B0ED
Uncharacterized protein {ECO:0000313|EMBL:KFN42567.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_bf_inoc_scaffold_33_curated_75
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83396..84685
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6DE75
Uncharacterized protein {ECO:0000313|EMBL:KFN42568.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_33_curated_76
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84831..85859
DNA (1029bp) protein (343aa)
Putative oxidoreductase, aldo/keto reductase family n=1 Tax=Variovorax paradoxus B4 RepID=T1XBY1_VARPD
Aldo/keto reductase {ECO:0000313|EMBL:AKC86449.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
putative oxidoreductase, aldo/keto reductase family
SCNpilot_bf_inoc_scaffold_33_curated_77
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86232..87302
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B53BD3
Uncharacterized protein {ECO:0000313|EMBL:KFN45026.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_33_curated_78
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87370..88167
DNA (798bp) protein (266aa)
Aldo/keto reductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4G5_MAGSA
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:BAE51260.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_bf_inoc_scaffold_33_curated_79
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

88387..89256
DNA (870bp) protein (290aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
Beta-alanine synthase id=4296753 bin=GWC2_Ignavibacteria_38_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SCNpilot_bf_inoc_scaffold_33_curated_80
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(89273..90751)
DNA (1479bp) protein (493aa)
aprE; peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.62)
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CCH01057.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CCH01057.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KAA4_9BACT
SCNpilot_bf_inoc_scaffold_33_curated_81
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90835..91827)
DNA (993bp) protein (331aa)
AraC family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71C51
Uncharacterized protein {ECO:0000313|EMBL:KFN42517.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_33_curated_82
unknown

Not on your lists

comp(91827..92306)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_83
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92986..95376)
DNA (2391bp) protein (797aa)
Beta-N-acetylhexosaminidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77573.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
N-acetyl-beta-hexosaminidase
SCNpilot_bf_inoc_scaffold_33_curated_84
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95588..98266)
DNA (2679bp) protein (893aa)
TonB dependent receptor n=1 Tax=uncultured organism RepID=T1WDB4_9ZZZZ
TonB-denpendent receptor {ECO:0000313|EMBL:EYR66127.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
TonB-dependent receptor
SCNpilot_bf_inoc_scaffold_33_curated_85
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98428..99459)
DNA (1032bp) protein (344aa)
Glucokinase {ECO:0000313|EMBL:EIL97975.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL97975.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET4_9GAMM
SCNpilot_bf_inoc_scaffold_33_curated_86
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

99857..101170
DNA (1314bp) protein (438aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET5_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:KIF34849.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
nagP; N-acetyl-glucosamine transporter
SCNpilot_bf_inoc_scaffold_33_curated_87

Not on your lists

101334..102380
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family n=1 Tax=mine drainage metagenome RepID=T1A6I4_9ZZZZ
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EQD37465.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_33_curated_88
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102476..103201)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7J5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95868.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_bf_inoc_scaffold_33_curated_89
unknown

Not on your lists

104151..104429
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_33_curated_90
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104793..105152)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=B0F5R8_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:ABY48975.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein; K07454 putative restriction endonuclease
Displaying items 61-90 of 566 in total

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