ggKbase home page

SCNpilot_bf_inoc_scaffold_42_curated_124

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(163992..164801)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 268.0
  • Bit_score: 332
  • Evalue 4.10e-88
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 268.0
  • Bit_score: 320
  • Evalue 6.10e-85
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003733A4A similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 268.0
  • Bit_score: 357
  • Evalue 1.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCACGGAATCGGCAACGATTTCGTCGTGATCGACTGCCGCGAGCGCGCCCTGCCGCTGACGGCTGCACAAGTCGCCCGGCTCGGCGATCGCCATCTCGGCGTCGGTTTCGACCAGCTGCTGACCATAGAACCGTCGCGCGATCCCGACTGCGCCTGGCGCTATGGCATCTACAACCGCGACGGCAGCCCAGCCGGCCAGTGCGGCAACGGCGTGCGCTGCGTCGCCGCCTGGTTGCGCCGCGCCGGCGCGCTGGCGGACGGACTGACCCGGCTGCAGAGCCCCAGCGGCGCGGTCGCCGTGGAAATGCTCGCCGACGGCCGCGTGCGCGTCGACATGGGCGTGCCGCAGTTCGCACCCGCAGCGATTCCGCTGCGCGAAGCGCAGTCGGCAACAACCTACAAGCGCACCCTCGGCGCCACTGAAATCGAGTTCGGCGCCGTGTCCATGGGCAACCCGCACGCGGTCATCGAAGTGGCCGACCTGGCCGTCGCGCCCGTCGCCGACTGGGGACCCGCGCTGGAAACCCATGCGGACTTTCCCGATCGCGCCAACATCGGCTTCGCGCAGGTGCTGTCGCCGCAGGCCATCCGCCTGCGCGTCTGGGAGCGCGGTGCCGGCGAAACCCAGGCCTGCGGCAGCGGCGCCTGCGCCGCGGTCGTCGCGCTCGCCCGGCGCGGCCGCGTCGGCGCGGACGTCGAGGTGCAACTGCCCGGCGGCCTGCTGCAGATTTCCTGGGCCGGACCGGGCGAACCGGTCTGGATGACCGGCCCCGCCGCATTCGTCTTCGAAGGGAACTATCACCTATGA
PROTEIN sequence
Length: 270
MHGIGNDFVVIDCRERALPLTAAQVARLGDRHLGVGFDQLLTIEPSRDPDCAWRYGIYNRDGSPAGQCGNGVRCVAAWLRRAGALADGLTRLQSPSGAVAVEMLADGRVRVDMGVPQFAPAAIPLREAQSATTYKRTLGATEIEFGAVSMGNPHAVIEVADLAVAPVADWGPALETHADFPDRANIGFAQVLSPQAIRLRVWERGAGETQACGSGACAAVVALARRGRVGADVEVQLPGGLLQISWAGPGEPVWMTGPAAFVFEGNYHL*