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SCNpilot_bf_inoc_scaffold_126_curated_28

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(32876..33787)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000377E9E3 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 290.0
  • Bit_score: 301
  • Evalue 8.10e-79
LysR family transcriptional regulator {ECO:0000313|EMBL:ESH88045.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 292.0
  • Bit_score: 300
  • Evalue 2.50e-78
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 295.0
  • Bit_score: 295
  • Evalue 1.40e-77

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Taxonomy

Cupriavidus sp. HPC(L) → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGATCGATTCGATTCGCTACGCTTGTTCACGCGCATCGTGGAGCTCGGAAGTTTCACGCGTGCAGCGGGCGAGCTCGGCATTCCGCGCGCCAGTGCGACGCATGCGATCAAGGCGCTGGAGCGCCGCCTCGGCGTTCGCCTGCTCGAGCGCACGACGCGGCAGGTCAACGTCACGCCCGACGGCCGGTTCTATTACGACTGCGGTTCGCATCTGCTGTACGAGCTCGACGAGGTCGAGGCCAGCCTGTCCCATGCCGTGCGCGAAGCCCGCGGCGTGCTGCGCCTGGATCTGCGCGGCAGCATCGCGCGGCAGCTGCTGCTGGCGCAGATCGACGACTTCTGCCGTGTCCATCCGCAGGTCGATCTGGTGATCAGCAACGGCGAACGCCTGGCCGACATGCTGCGCGACGGCGTCGACTGCCTCGTGCGCGCGGGCGAGCCGCCGGAATCGTCGATGACGGCGCACGCGCTCGCGCAGCTGCCGCAGGTAACCTGCGCGAGCCCGGCCTATCTGGAGCGCCACGCCGAGCTGCGCGGTCCCGACGATCTCGCCACGCATGTCGGCATAGGCTGGCTGCAGCGTCAGCGCGACGGCGAGGCGCGCCTCGTGCTCGGCGACGACGAAGCGCCGCGTGAATACCGTCTGCGCAGCCGCATCAGCGTCAGCGACGACGAAAGCTATCTGCTGTGTGCGCTGCGCGGCGGCGGGTTGATCCAGGCGCCGCGGCTGCAGGTCGAAACCCACCTGCGCGACGGCAGCCTCGTCGAGGTACTCGCCGCGTTCGCCGCGCCGCCGCTGCGCGTGGCGCTGCTGCATCCGGCCACGCGGCGGCTCGCGCCGGCGGCGCAGGCCTTCGTCGACTGGGCGATCGCGCGCTGTGCAGCCTATCGGCGCGAACGGCGCGACTGA
PROTEIN sequence
Length: 304
MDRFDSLRLFTRIVELGSFTRAAGELGIPRASATHAIKALERRLGVRLLERTTRQVNVTPDGRFYYDCGSHLLYELDEVEASLSHAVREARGVLRLDLRGSIARQLLLAQIDDFCRVHPQVDLVISNGERLADMLRDGVDCLVRAGEPPESSMTAHALAQLPQVTCASPAYLERHAELRGPDDLATHVGIGWLQRQRDGEARLVLGDDEAPREYRLRSRISVSDDESYLLCALRGGGLIQAPRLQVETHLRDGSLVEVLAAFAAPPLRVALLHPATRRLAPAAQAFVDWAIARCAAYRRERRD*