ggKbase home page

SCNpilot_bf_inoc_scaffold_126_curated_92

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(106179..107654)

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000374AA68 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 494.0
  • Bit_score: 348
  • Evalue 9.30e-93
NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98372.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 495.0
  • Bit_score: 353
  • Evalue 4.10e-94
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 496.0
  • Bit_score: 317
  • Evalue 9.50e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
GTGCTGATATTGCCGCTGCACCGTCCGTTGAACCGGGCGAATTTTCCGTTCGCGACCATGTCCCTGGTCGTGATCAATGTATTCGTGTTCCTGTTCCTGCAGAGCGGCGACGGCGCGGCGCTGCAGCGTGCCGCGCACTACTACGGCGAGGCCGGGCTCGCGCAGATCGAGCTGCCGCTGTACCGCGACTGGCGCCAGGCGAATCCGCAGCCGCGGCTGGACGAACTGCTGCCGCATCTGGACGAGCTGCCGCAGGAACAGCTCGTGAGCCTGCTGCAGGCCGACGCGCACTTCCTGCGCGCGCTGCACGAGAACGCGCTGATCGGCGAACAGGATCCGCGGCATGCCCAGTGGAAGCTGCACCGCGACGAATTCGAGCGGCTGTGGCAGCGCCAGTTCACCGAGCGCCACGTGCTGCGCTATTCCGAACTCGATCCGCTGCGCGTACTGAGCTCGATGTTCCTGCATGGCGGCTTCGGCCATCTGTTCGGCAACATGCTGTTCCTCGTCGTGCTCGGCCTGCTGGTCGAAGGCGCGCTCGGCGCCGGTCTGTTCCTGGGCCTGTACCTGCTTGCCGGTTGCGGCGCCGCGCTGACCGCGCTGGCTTATCGCTGGGGCGATGTCGGCGCGATGCTCGGCGCTTCGGGCGCGATCGCCGGCCTCATGGGCGCCTATTGCGTGCTCTGGGGCACGCGCCAGGTGCGCGTGTTCTGGTGGGCCTTCGTCGCGTTCGGCTATTCGCGCATCACGGCGCTGTGGCTGCTGCCGTTCTGGCTCGGCTGGGAACTGTTCAACCTGATGGCCAACGCCGGGGCCGGTGTGGGCTTCGACGCGCATGCCGGCGGCATCGTCAGCGGCGCCCTGCTCGCGCTGGGCGTGCGCAGCCTGGGCTGGGAGCAGCGCGAGTTCCTCGACGCCGACGAGAAGGCCGATCAGGCCAAGGCCGCCGGCGATGCGCTGGAACGTGCGCTGCAGCATCTGGGCCGGCTCGAAACACGTCAGGCGCTGGCGCTGCTGGAACCGCTGGACCGCGCCGGCGCGCCGTCGCTGGATGTGCGCATCGCGCTGTACCGCTGCGCGCGCTACGCCAACCAGCCGGCGGCGCTGCGTGCGGCGCTGGCGCGCGTGATCGAGCTGCCGCTGGCCGATGCGGCCGCGGCGCGCAAGGTCAAGCAGGTCGTCGACGACTACCGCAAGGTCGATGCGGCCGGCATCGACCTGCCGCCGCCGCAGCAACTGCAGCTGGCGCGGGCGTGGCTGCGCATAGGCGCGGATACGGATGCCGAGCAGCTTGCGCGCGACCTCGGCGCGCGCGCGGCCGATCTGCCGGGTCTGGCCGAGCTGTGCTGGCAGCTGGCCCAGCGCGCGCGCGAAGGCTCGCCGCAATGGCGCGCGCGATTGCAGCTGATCGCCAGCCATTGCCCGCGCAGCGAACTTGCGCCGAAGGCGGCGTTCCTGCTCGCGCAGACCCCGTAG
PROTEIN sequence
Length: 492
VLILPLHRPLNRANFPFATMSLVVINVFVFLFLQSGDGAALQRAAHYYGEAGLAQIELPLYRDWRQANPQPRLDELLPHLDELPQEQLVSLLQADAHFLRALHENALIGEQDPRHAQWKLHRDEFERLWQRQFTERHVLRYSELDPLRVLSSMFLHGGFGHLFGNMLFLVVLGLLVEGALGAGLFLGLYLLAGCGAALTALAYRWGDVGAMLGASGAIAGLMGAYCVLWGTRQVRVFWWAFVAFGYSRITALWLLPFWLGWELFNLMANAGAGVGFDAHAGGIVSGALLALGVRSLGWEQREFLDADEKADQAKAAGDALERALQHLGRLETRQALALLEPLDRAGAPSLDVRIALYRCARYANQPAALRAALARVIELPLADAAAARKVKQVVDDYRKVDAAGIDLPPPQQLQLARAWLRIGADTDAEQLARDLGARAADLPGLAELCWQLAQRAREGSPQWRARLQLIASHCPRSELAPKAAFLLAQTP*