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SCNpilot_bf_inoc_scaffold_231_curated_23

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20678..22552)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 625.0
  • Bit_score: 1097
  • Evalue 0.0
phosphomethylpyrimidine synthase ThiC n=1 Tax=Dyella japonica RepID=UPI0002F34B7C similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 625.0
  • Bit_score: 1097
  • Evalue 0.0
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 623.0
  • Bit_score: 1089
  • Evalue 0.0

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1875
ATGAATGCGCTGCCTTCCGACCTGGTGCGTCAGACCCAGGAACTCTCCGAACAGGTGACGCGGCCGATTCCCGGCTCGCGCAAGATCCACGTGACCGGCAGCCGCGGCGACCTGCGCGTGCCGCTGCGCGAAATCGCGCAGGCCGACACGCCGCTGGTGTTCGGTGCCGAGAAGAATGCGCCGGTGACGGTCTACGACACCTCCGGTCCGTACACCGATCCCGATTACCGCGTCGATCTCGGCGCCGGCCTGCCGCCGCTGCGTGCCGCCTGGATCGCCGAGCGCGGCGATGTCGAACAACTGGCCGGCCTGTCGTCCGAGTTCGGCCGCAAGCGCGAGGCCGACCGTCGTCTCGATGCCGTGCGCTTTCCGAACCTGCGCCGTCCGCTGCGTGCCAAGGCCGGCGCCAACGTGACGCAGATGCACTACGCGCGCCGTGGCATCGTCACGCCGGAAATGGAATACATCGCGCTGCGCGAGAATCAGCGCATCGAAGCGCTGGAAGCGCATCTGCGCGTGCAGCATCCGGGCGAGAGCTTCGGCGCCGCGCTGCCCCGGCTCATCACGCCGGAGTTCGTGCGCGACGAGGTTGCCCGCGGTCGCGCCATCATCCCGAGCAACATCAACCATCCCGAATCCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAACGCCAACATCGGCAATTCCGCGGTCACTTCGTCGATCGCCGAGGAAGTCGAGAAGATGGTCTGGTCGATACGCTGGGGCGGCGACACGGTCATGGACCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAATGGATATTGCGCAACTCGCCGGTGCCGATCGGCACGGTGCCGATCTATCAGGCGCTGGAGAAAGTGGACGGCAAGGCCGAAGAGCTGACCTGGGAGATCTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGACTATTTCACGATCCACGCCGGCGTGCGTCTTGCACACATCCCGCTGACCGCCAAGCGCGTCACCGGCATCGTCAGCCGCGGCGGATCGATACTCGCGAAGTGGTGCCTGGCCCATCATCGCGAGAATTTCCTCTACACGCATTTCGAGGAAATCTGCGAAATCATGAAGGCCTACGACGTGGCCTTCTCGCTCGGCGACGGCCTGCGTCCGGGCTCCATTGCCGACGCCAACGACGCGGCGCAGTTCGCCGAGCTCGACACCCTGGGCGAACTGACCCACATCGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGTCCGGGCCACGTGCCCATGCAGCTGATCAAGGAAAACATGGAGCGCCAGCTGCGCGTCTGCAGCGAGGCGCCGTTCTACACCCTGGGACCGCTCACCACCGACATCGCGCCGGGCTACGACCACATCACGAGCGCGATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCCATGCTCTGCTACGTGACGCCGAAGGAGCATCTGGGTTTGCCGAACAAGCAGGACGTGCGCGACGGCATCATCGCCTACAAGATCGCCGCGCATGCGGCCGACCTGGCCAAGGGGCATCCGGGCGCGCAGGCGCGCGACAACGCGCTGTCCAAGGCGCGCTTCGAATTCCGCTGGCAGGATCAGTTCAACCTCGGCCTCGATCCGGAGAAGGCGCAGGAGTTCCACGACGAGACCCTGCCCAAGGACGCGCACAAGGTCGCCCACTTCTGCTCCATGTGCGGGCCGCATTTCTGCTCGATGAAGATCACCCAGGACGTGCGCGACTACGCCGCCGAGAAGGGCGTCAGCGAGAATCAGGCGCTGGAAGCCGGCCTGCAGCAGAAGGCGCAGGAATTCCGCGACGGCGGCGCGCAGCTGTATCGCGAGGCCTGA
PROTEIN sequence
Length: 625
MNALPSDLVRQTQELSEQVTRPIPGSRKIHVTGSRGDLRVPLREIAQADTPLVFGAEKNAPVTVYDTSGPYTDPDYRVDLGAGLPPLRAAWIAERGDVEQLAGLSSEFGRKREADRRLDAVRFPNLRRPLRAKAGANVTQMHYARRGIVTPEMEYIALRENQRIEALEAHLRVQHPGESFGAALPRLITPEFVRDEVARGRAIIPSNINHPESEPMIIGRNFLTKINANIGNSAVTSSIAEEVEKMVWSIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRDTLIEQAEQGVDYFTIHAGVRLAHIPLTAKRVTGIVSRGGSILAKWCLAHHRENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDAAQFAELDTLGELTHIAWKHDVQTMIEGPGHVPMQLIKENMERQLRVCSEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKQDVRDGIIAYKIAAHAADLAKGHPGAQARDNALSKARFEFRWQDQFNLGLDPEKAQEFHDETLPKDAHKVAHFCSMCGPHFCSMKITQDVRDYAAEKGVSENQALEAGLQQKAQEFRDGGAQLYREA*