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SCNpilot_bf_inoc_scaffold_231_curated

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_231_curated_1
unknown

Not on your lists

261..590
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633..1070
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRY7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89978.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K09005 hypothetical protein
SCNpilot_bf_inoc_scaffold_231_curated_3
unknown

Not on your lists

comp(968..1210)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_4
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1370..2200
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E19A9
Uncharacterized protein {ECO:0000313|EMBL:KFN49140.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_231_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2270..2470)
DNA (201bp) protein (67aa)
rubredoxin n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F83F5E
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
Rubredoxin-type Fe(Cys)4 protein
SCNpilot_bf_inoc_scaffold_231_curated_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2579..3220
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangni
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000367D53B
thiamine-phosphate pyrophosphorylase
SCNpilot_bf_inoc_scaffold_231_curated_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3217..4503
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ8_9GAMM
glutamate-1-semialdehyde-2,1-aminomutase
SCNpilot_bf_inoc_scaffold_231_curated_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..5755)
DNA (1242bp) protein (414aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
acetylornithine and succinylornithine aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
acetylornithine aminotransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003808F13
SCNpilot_bf_inoc_scaffold_231_curated_9
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5887..7014
DNA (1128bp) protein (376aa)
cystathionine gamma-synthase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36B01
Uncharacterized protein {ECO:0000313|EMBL:KFN42469.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
SCNpilot_bf_inoc_scaffold_231_curated_10
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7108..7527)
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=2736306 bin=GWF1_Xanthomonadales_69_6 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Glyoxalase {ECO:0000313|EMBL:KFN45647.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_bf_inoc_scaffold_231_curated_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7567..8388)
DNA (822bp) protein (274aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDE8_9GAMM
Short-chain dehydrogenase {ECO:0000313|EMBL:GAN44916.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_bf_inoc_scaffold_231_curated_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8468..9076)
DNA (609bp) protein (203aa)
Peptidase S16, lon domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDE9_9GAMM
Peptidase S16 {ECO:0000313|EMBL:GAN44917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase S16, lon domain protein
SCNpilot_bf_inoc_scaffold_231_curated_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9095..10459)
DNA (1365bp) protein (455aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Dyella ginsengisoli RepID=UPI000345480F
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:GAN44918.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_231_curated_14
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10463..11032)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z5I1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIC20551.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_231_curated_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11109..11681)
DNA (573bp) protein (191aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
adenylate kinase-like kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDF3_9GAMM
SCNpilot_bf_inoc_scaffold_231_curated_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11889..13151
DNA (1263bp) protein (421aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Miz
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ0_9GAMM
SCNpilot_bf_inoc_scaffold_231_curated_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13195..13554)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00035F8F37
Putative inner membrane protein {ECO:0000313|EMBL:CDK98806.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_231_curated_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13973..16006
DNA (2034bp) protein (678aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
pyrophosphatase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EDD2D
SCNpilot_bf_inoc_scaffold_231_curated_19
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16237..17076
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF01588.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
SCNpilot_bf_inoc_scaffold_231_curated_20
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17264..17806
DNA (543bp) protein (181aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DEA77
SCNpilot_bf_inoc_scaffold_231_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17882..18904)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003604E61
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87544.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_231_curated_22
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19043..20626
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003463836
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58747.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
calcium-binding protein
SCNpilot_bf_inoc_scaffold_231_curated_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20678..22552)
DNA (1875bp) protein (625aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphomethylpyrimidine synthase ThiC n=1 Tax=Dyella japonica RepID=UPI0002F34B7C
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
SCNpilot_bf_inoc_scaffold_231_curated_24
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22755..23282)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374E972
Uncharacterized protein {ECO:0000313|EMBL:KFN45230.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_231_curated_25
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23496..24629
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037018B3
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_231_curated_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24814..28002
DNA (3189bp) protein (1063aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365A08E
Multidrug transporter AcrB {ECO:0000313|EMBL:AKC86264.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
acriflavin resistance protein
SCNpilot_bf_inoc_scaffold_231_curated_27
unknown

Not on your lists

28013..28330
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28458..29114
DNA (657bp) protein (219aa)
Protein-L-isoaspartate carboxylmethyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDH0_9GAMM
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AHX15693.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
protein-L-isoaspartate carboxylmethyltransferase
SCNpilot_bf_inoc_scaffold_231_curated_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29185..30579
DNA (1395bp) protein (465aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS11_9GAMM
Type I secretion protein TolC {ECO:0000313|EMBL:GAN45914.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type I secretion outer membrane protein, TolC family
SCNpilot_bf_inoc_scaffold_231_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30655..31947)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374B00E
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AGG87538.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 109 in total

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