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SCNpilot_bf_inoc_scaffold_231_curated_29

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 29185..30579

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS11_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 460.0
  • Bit_score: 407
  • Evalue 1.60e-110
Type I secretion protein TolC {ECO:0000313|EMBL:GAN45914.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 466.0
  • Bit_score: 498
  • Evalue 9.70e-138
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 458.0
  • Bit_score: 399
  • Evalue 1.40e-108

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGACCAAGCGAAACCCGTTCAAGCTGCTGCCCCTGTCACTGGCCCTCGCGCTGGTGCCGGCGCTCGCCTCGGCCGACGATCTGATCCAGGTGTACGACCTCGCCCGTCAGAACGATCCGGTTCTGTCCGGTGCCGAGGCCCAGCGCCTCTCGGTCGGCGAAGGCGTCGACCAGGCCACCGCCGCGCTGCTGCCGCAGATCTCCGCCTCGCTGAGCTATTCCGACAGCAGCCGCGACCAGTACAGCGCCGGCGTGGACCGCAATCAGCAGGGCGCCCTCGTCCCGCTGGTCTACACCACTTCGAGCGACGGCCGCGGCACGGTGCTGACCGGCCAGTTGACCCAGTCCATCCTCGACTTCAGCAAGTGGACCGCGCGCAAGGCCGCCCGCGAGCTCGCCCGCCGCGGCGACGCCCAGTACGTGCAGGCGGAACAGAATCTGTCCATCCGCGTCGCCACGGCCTATTTCGCCGTGCTGACCGCGGAAGACACGCTGACCTTCTCCGAAGCCGAAGAGAAGGCGCTGGGCCGCCAGCTCGATCAGGCGCAGCAGCGCTTCGAGGTCGGCCTGTCGGCGATCACCGACGTCAACGAAGCCAAGGCCCAGTACGACTCCGCGCGCGCGTCCACGATCGACGCCCGCAACGCGCTGGACGACGCCCGTGAAGCCCTGCGCGAAATCACCTCGAAGGAACCCGGTGCGCTGGCCCGCCTGCGCACCGAGATCCCGATGCAGCCGCCGGCGCCGAACGACATGGAAGCCTGGGTCAACAAGGCGCTGGCCGAAAACCCGGGCCTGAAGGCGCAGGAATATGCCGTCTCGGCCGCGCAGGCCAACATCAACACCGCGCGCTCGGGTCACCTGCCGACCATCTCCGGCTCCTACACCTACCAGCGTTCGCCGACCTGGGGCGACGGCAGCTCAAGCCTGAACCCGACCTTCGGCGACAGCCACAGCAACTCGCGCACGACCACGCGCGGATTCGGCCTGCAGCTCAACGTGCCGATCTTCAGCGGCGGCTACACCCAGTCGCGCGTGCGCCAGGCGGTCTACGACCGCGATGCGGCGCAGGACACGCTGGAACAGCAGAAGCGCGCGCTCGTGCGCAACACGCGCCTGAACTTCCGCGCCGTCGTAGCCGGCATCAGCGAGGTCGAGGCGCGCAAGCAGGCCGTGGTCTCGGCCAACAGCGCGCTGGAAGCGACCCAGGCCGGCTTCGAAGTCGGCACCCGCACCATCGTCGACGTGCTGCTGTCGCAGCGCCAGCTCTACCAGGCCCAGCGCGATCTGTCCCAGTCGCGCCACAGCTTCGTGCTGAACCAGCTGCTGCTGCGCCAGTCGGCCGGCAACGTCGGTCCGAACGATCTGAAGGAAGTCAACGCGCTGCTCGAATGA
PROTEIN sequence
Length: 465
MTKRNPFKLLPLSLALALVPALASADDLIQVYDLARQNDPVLSGAEAQRLSVGEGVDQATAALLPQISASLSYSDSSRDQYSAGVDRNQQGALVPLVYTTSSDGRGTVLTGQLTQSILDFSKWTARKAARELARRGDAQYVQAEQNLSIRVATAYFAVLTAEDTLTFSEAEEKALGRQLDQAQQRFEVGLSAITDVNEAKAQYDSARASTIDARNALDDAREALREITSKEPGALARLRTEIPMQPPAPNDMEAWVNKALAENPGLKAQEYAVSAAQANINTARSGHLPTISGSYTYQRSPTWGDGSSSLNPTFGDSHSNSRTTTRGFGLQLNVPIFSGGYTQSRVRQAVYDRDAAQDTLEQQKRALVRNTRLNFRAVVAGISEVEARKQAVVSANSALEATQAGFEVGTRTIVDVLLSQRQLYQAQRDLSQSRHSFVLNQLLLRQSAGNVGPNDLKEVNALLE*