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SCNpilot_bf_inoc_scaffold_231_curated

Search features with annotation key words

Displaying items 61-90 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_231_curated_61
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67508..68137
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000368446B
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADI30715.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
SCNpilot_bf_inoc_scaffold_231_curated_62
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68134..69069
DNA (936bp) protein (312aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
phosphatidate cytidylyltransferase n=1 Tax=Methyloversatilis universalis RepID=UPI00036BB6E0
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EGK71506.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
SCNpilot_bf_inoc_scaffold_231_curated_63
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69094..69690
DNA (597bp) protein (199aa)
Lipoprotein, putative n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V7F3_PSEA7
hypothetical protein
Lipoprotein, putative {ECO:0000313|EMBL:ABR84486.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
SCNpilot_bf_inoc_scaffold_231_curated_64
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69828..70247)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NJA4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ73450.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC402.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_231_curated_65
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70259..79594)
DNA (9336bp) protein (3112aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003737B44
Uncharacterized protein {ECO:0000313|EMBL:KKE81605.1}; TaxID=1129367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea S4054.;"
Rhs family protein
SCNpilot_bf_inoc_scaffold_231_curated_66
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80119..81318
DNA (1200bp) protein (400aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE3_9GAMM
SCNpilot_bf_inoc_scaffold_231_curated_67
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81769..84996
DNA (3228bp) protein (1076aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_231_curated_68
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85025..88324
DNA (3300bp) protein (1100aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_bf_inoc_scaffold_231_curated_69
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88379..93451)
DNA (5073bp) protein (1691aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037E7D3E
aaa ATPase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_231_curated_70
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93703..95793)
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037299DA
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_231_curated_71
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96074..96697)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000363466A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_bf_inoc_scaffold_231_curated_72
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96694..97050)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036EC603
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU36571.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_bf_inoc_scaffold_231_curated_73
unknown

Not on your lists

comp(97040..97657)
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_74
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97666..98091)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000381A3BD
hypothetical protein; K09980 hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_231_curated_75
unknown

Not on your lists

98439..99413
DNA (975bp) protein (325aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_76
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

99711..102503
DNA (2793bp) protein (931aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40069.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCNpilot_bf_inoc_scaffold_231_curated_77
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102741..104243)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E23A0
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_bf_inoc_scaffold_231_curated_78
unknown

Not on your lists

comp(104631..104909)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_231_curated_79
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105102..106646)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E23A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16669.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_bf_inoc_scaffold_231_curated_80
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106827..107633
DNA (807bp) protein (269aa)
Putative periplasmic protein TonB, links inner and outer membranes n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWI2_9PROT
Putative periplasmic protein TonB, links inner and outer membranes {ECO:0000313|EMBL:CDK97635.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
tonb family protein; K03832 periplasmic protein TonB
SCNpilot_bf_inoc_scaffold_231_curated_81
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107713..108252
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035D3DA0
putative DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:AGI23527.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
SCNpilot_bf_inoc_scaffold_231_curated_82
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108335..109285
DNA (951bp) protein (317aa)
FecR, iron siderophore sensor protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M794_9PROT
FecR, iron siderophore sensor protein {ECO:0000313|EMBL:AJD53196.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
putative transmembrane sensor
SCNpilot_bf_inoc_scaffold_231_curated_83
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

109282..111615
DNA (2334bp) protein (778aa)
TonB-dependent siderophore receptor n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V4L7_ARCNC
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADG92922.1}; Flags: Precursor;; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
SCNpilot_bf_inoc_scaffold_231_curated_84
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(111970..115509)
DNA (3540bp) protein (1180aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ09_HERA2
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ABX07049.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_bf_inoc_scaffold_231_curated_85
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115798..118011
DNA (2214bp) protein (738aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380510F
Uncharacterized protein {ECO:0000313|EMBL:AHY58589.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alpha/beta hydrolase fold protein
SCNpilot_bf_inoc_scaffold_231_curated_86
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118191..119549
DNA (1359bp) protein (453aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C924E
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
SCNpilot_bf_inoc_scaffold_231_curated_87
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119875..120573
DNA (699bp) protein (233aa)
Putative glutathione S-transferase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZBA7_PSEAC
glutathione S transferase-related protein
Putative glutathione S-transferase {ECO:0000313|EMBL:GAD65011.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
SCNpilot_bf_inoc_scaffold_231_curated_88
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(120598..121311)
DNA (714bp) protein (238aa)
LytTR family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B62C31
Uncharacterized protein {ECO:0000313|EMBL:KIJ71218.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
lytT1; Sensory transduction protein lytT
SCNpilot_bf_inoc_scaffold_231_curated_89
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121308..122378)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003669E95
Uncharacterized protein {ECO:0000313|EMBL:KFN42557.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Sensor protein lytS
SCNpilot_bf_inoc_scaffold_231_curated_90
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122619..123566)
DNA (948bp) protein (316aa)
yegU; putative ADP-ribosylglycohydrolase; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-]
Putative ADP-ribosylglycohydrolase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MPX4_CORCM
Putative ADP-ribosylglycohydrolase {ECO:0000313|EMBL:AFE10877.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying items 61-90 of 109 in total

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