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SCNpilot_BF_INOC_scaffold_2639_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2639_curated_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..322)
DNA (321bp) protein (107aa)
50S ribosomal protein L6 n=2 Tax=Clostridium RepID=A7VR38_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L6P
SCNpilot_BF_INOC_scaffold_2639_curated_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(335..697)
DNA (363bp) protein (121aa)
30S ribosomal protein S8 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHT4_9FIRM
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2639_curated_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(723..908)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=3 Tax=Clostridiales RepID=C5EVN9_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
30S ribosomal protein S14
SCNpilot_BF_INOC_scaffold_2639_curated_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(921..1460)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Clostridium sp. CAG:217 RepID=R6IY00_9CLOT rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
50S ribosomal protein L5 rbh
SCNpilot_BF_INOC_scaffold_2639_curated_5

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comp(1476..1799)
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=gut metagenome RepID=J9GWR2_9ZZZZ
50S ribosomal protein L24 {ECO:0000313|EMBL:EJX07463.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
50S ribosomal protein L24
SCNpilot_BF_INOC_scaffold_2639_curated_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1813..2181)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I468_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
50S ribosomal protein L14
SCNpilot_BF_INOC_scaffold_2639_curated_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2207..2461)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=4 Tax=Clostridiales RepID=B0P2Y9_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
30S ribosomal protein S17
SCNpilot_BF_INOC_scaffold_2639_curated_8
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2481..2702)
DNA (222bp) protein (74aa)
50S ribosomal protein L29 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LBM1_9FIRM
hypothetical protein
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2639_curated_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2702..3127)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NHS4_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
rplP; 50S ribosomal protein L16
SCNpilot_BF_INOC_scaffold_2639_curated_10
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3127..3798)
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A9FD5 rbh
rpsC; 30S ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2639_curated_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3817..4152)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVG6_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
rplV; ribosomal protein L22
SCNpilot_BF_INOC_scaffold_2639_curated_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4173..4454)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3M8_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
SSU ribosomal protein S19P
SCNpilot_BF_INOC_scaffold_2639_curated_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4478..5383)
DNA (906bp) protein (302aa)
50S ribosomal protein L2 n=2 Tax=Clostridium RepID=R6MVY1_9CLOT rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
rplB; ribosomal protein L2 rbh
SCNpilot_BF_INOC_scaffold_2639_curated_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5417..5710)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sp. CAG:352 RepID=R6R5D8_9CLOT
hypothetical protein
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2639_curated_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5710..6333)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sp. CAG:352 RepID=R6RBV8_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
LSU ribosomal protein L4P
SCNpilot_BF_INOC_scaffold_2639_curated_16
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6349..6984)
DNA (636bp) protein (212aa)
50S ribosomal protein L3 n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XYF6_9FIRM rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
rplC; 50S ribosomal protein L3
SCNpilot_BF_INOC_scaffold_2639_curated_17
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7115..7426)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U819_ETHHY
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
SCNpilot_BF_INOC_scaffold_2639_curated_18
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7785..8033
DNA (249bp) protein (83aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:964 RepID=R6U189_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC78245.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
polysaccharide deacetylase
Displaying 18 items

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